Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm27595-201ENSMUST00000184579 112 ntBASIC7.76□□□□□ -1.17
Ccdc40Q8BI79 Gm20587-201ENSMUST00000186367 1186 ntBASIC7.76□□□□□ -1.17
Ccdc40Q8BI79 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC7.76□□□□□ -1.17
Ccdc40Q8BI79 Gm40319-201ENSMUST00000199785 481 ntBASIC7.76□□□□□ -1.17
Ccdc40Q8BI79 Gm18207-201ENSMUST00000205486 526 ntBASIC7.76□□□□□ -1.17
Ccdc40Q8BI79 Gm30694-201ENSMUST00000209278 1230 ntBASIC7.76□□□□□ -1.17
Ccdc40Q8BI79 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC7.76□□□□□ -1.17
Ccdc40Q8BI79 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC7.76□□□□□ -1.17
Ccdc40Q8BI79 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC7.76□□□□□ -1.17
Ccdc40Q8BI79 AC161374.2-201ENSMUST00000223662 596 ntBASIC7.76□□□□□ -1.17
Ccdc40Q8BI79 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ccdc40Q8BI79 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ccdc40Q8BI79 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ccdc40Q8BI79 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
Ccdc40Q8BI79 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
Ccdc40Q8BI79 AC122346.1-201ENSMUST00000225266 3732 ntBASIC7.76□□□□□ -1.17
Ccdc40Q8BI79 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Ccdc40Q8BI79 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ccdc40Q8BI79 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Ccdc40Q8BI79 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ccdc40Q8BI79 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ccdc40Q8BI79 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC7.76□□□□□ -1.17
Ccdc40Q8BI79 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Ccdc40Q8BI79 AC158988.1-201ENSMUST00000226731 2624 ntBASIC7.76□□□□□ -1.17
Ccdc40Q8BI79 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Ccdc40Q8BI79 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC7.76□□□□□ -1.17
Ccdc40Q8BI79 Gm45061-201ENSMUST00000204395 2095 ntBASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Gm14509-201ENSMUST00000117312 1286 ntBASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Gm11416-201ENSMUST00000119111 863 ntBASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Gm15730-201ENSMUST00000121828 415 ntBASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Gm25845-201ENSMUST00000122588 310 ntBASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Gm22562-201ENSMUST00000157334 111 ntBASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Gm23822-201ENSMUST00000158739 128 ntBASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Gm16184-201ENSMUST00000162324 573 ntBASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Gm8164-201ENSMUST00000169120 1192 ntBASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Gm4246-201ENSMUST00000172822 216 ntBASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Gm29739-201ENSMUST00000191760 529 ntBASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Gm42472-201ENSMUST00000201626 859 ntBASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 AC129537.1-202ENSMUST00000226619 430 ntBASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Gm5841-201ENSMUST00000195307 2177 ntBASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ccdc40Q8BI79 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Gm42611-201ENSMUST00000199446 3407 ntBASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Gm37730-201ENSMUST00000192432 2211 ntBASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Gm38380-201ENSMUST00000195718 2248 ntBASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Gm12365-201ENSMUST00000117931 568 ntBASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Gm13915-201ENSMUST00000119314 931 ntBASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Gm24530-201ENSMUST00000157948 288 ntBASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Gm23117-201ENSMUST00000158482 108 ntBASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Gm25082-201ENSMUST00000177296 255 ntBASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Gm7678-201ENSMUST00000181879 943 ntBASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Mir6930-201ENSMUST00000183859 68 ntBASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Gm29348-201ENSMUST00000189555 779 ntTSL 3 BASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Gm38164-201ENSMUST00000192810 330 ntBASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Gm30708-201ENSMUST00000202183 312 ntBASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC7.74□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms