Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Smarcc1P97496 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smarcc1P97496 Serpina1a-201ENSMUST00000072876 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smarcc1P97496 Sox6-206ENSMUST00000205405 2903 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Smarcc1P97496 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Smarcc1P97496 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smarcc1P97496 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC9.4□□□□□ -0.91
Smarcc1P97496 Cacnb2-214ENSMUST00000193800 2117 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smarcc1P97496 Cblb-205ENSMUST00000227756 3378 ntBASIC9.4□□□□□ -0.91
Smarcc1P97496 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Smarcc1P97496 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smarcc1P97496 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smarcc1P97496 Gm18830-201ENSMUST00000199036 1396 ntBASIC9.39□□□□□ -0.91
Smarcc1P97496 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smarcc1P97496 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smarcc1P97496 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smarcc1P97496 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smarcc1P97496 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smarcc1P97496 Nrep-203ENSMUST00000171533 2156 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Smarcc1P97496 1500026H17Rik-201ENSMUST00000181598 3027 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smarcc1P97496 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC9.39□□□□□ -0.91
Smarcc1P97496 Gm22927-201ENSMUST00000104268 131 ntBASIC9.39□□□□□ -0.91
Smarcc1P97496 Gm12939-201ENSMUST00000117303 165 ntBASIC9.39□□□□□ -0.91
Smarcc1P97496 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC9.39□□□□□ -0.91
Smarcc1P97496 Gm11850-201ENSMUST00000119679 479 ntBASIC9.39□□□□□ -0.91
Smarcc1P97496 Trav8-2-201ENSMUST00000130122 337 ntBASIC9.39□□□□□ -0.91
Smarcc1P97496 Gm22882-201ENSMUST00000157749 124 ntBASIC9.39□□□□□ -0.91
Smarcc1P97496 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC9.39□□□□□ -0.91
Smarcc1P97496 Mir6241-201ENSMUST00000184225 103 ntBASIC9.39□□□□□ -0.91
Smarcc1P97496 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC9.39□□□□□ -0.91
Smarcc1P97496 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC9.39□□□□□ -0.91
Smarcc1P97496 AC099760.1-201ENSMUST00000196300 153 ntBASIC9.39□□□□□ -0.91
Smarcc1P97496 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smarcc1P97496 Gm42752-201ENSMUST00000198394 1106 ntBASIC9.39□□□□□ -0.91
Smarcc1P97496 Gm43553-201ENSMUST00000200900 685 ntBASIC9.39□□□□□ -0.91
Smarcc1P97496 Gm17834-201ENSMUST00000204322 891 ntBASIC9.39□□□□□ -0.91
Smarcc1P97496 1700018P08Rik-201ENSMUST00000212522 1239 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smarcc1P97496 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC9.39□□□□□ -0.91
Smarcc1P97496 Gm18789-201ENSMUST00000216115 550 ntBASIC9.39□□□□□ -0.91
Smarcc1P97496 Gm19212-201ENSMUST00000216642 862 ntBASIC9.39□□□□□ -0.91
Smarcc1P97496 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC9.39□□□□□ -0.91
Smarcc1P97496 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Smarcc1P97496 Gm17917-201ENSMUST00000218561 953 ntBASIC9.39□□□□□ -0.91
Smarcc1P97496 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC9.39□□□□□ -0.91
Smarcc1P97496 AC163621.1-201ENSMUST00000220695 379 ntBASIC9.39□□□□□ -0.91
Smarcc1P97496 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Smarcc1P97496 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
Smarcc1P97496 Gm12183-201ENSMUST00000120566 1848 ntBASIC9.39□□□□□ -0.91
Smarcc1P97496 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smarcc1P97496 Gm15704-201ENSMUST00000144757 2818 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smarcc1P97496 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smarcc1P97496 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smarcc1P97496 Gm29154-211ENSMUST00000213655 1499 ntTSL 5 BASIC9.39□□□□□ -0.91
Smarcc1P97496 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smarcc1P97496 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smarcc1P97496 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Smarcc1P97496 Sestd1-201ENSMUST00000102659 2720 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smarcc1P97496 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC9.38□□□□□ -0.91
Smarcc1P97496 Mapk14-203ENSMUST00000114752 3148 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smarcc1P97496 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smarcc1P97496 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC9.38□□□□□ -0.91
Smarcc1P97496 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC9.38□□□□□ -0.91
Smarcc1P97496 Gm4767-202ENSMUST00000188096 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smarcc1P97496 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smarcc1P97496 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smarcc1P97496 AC159379.2-201ENSMUST00000220244 2482 ntBASIC9.38□□□□□ -0.91
Smarcc1P97496 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smarcc1P97496 Gm38099-201ENSMUST00000193280 3170 ntBASIC9.38□□□□□ -0.91
Smarcc1P97496 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smarcc1P97496 Gm22707-201ENSMUST00000103834 110 ntBASIC9.38□□□□□ -0.91
Smarcc1P97496 Gm8662-201ENSMUST00000118644 574 ntBASIC9.38□□□□□ -0.91
Smarcc1P97496 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC9.38□□□□□ -0.91
Smarcc1P97496 Gm22588-201ENSMUST00000157510 140 ntBASIC9.38□□□□□ -0.91
Smarcc1P97496 Gm16298-201ENSMUST00000161107 420 ntBASIC9.38□□□□□ -0.91
Smarcc1P97496 Gm3344-201ENSMUST00000169610 603 ntBASIC9.38□□□□□ -0.91
Smarcc1P97496 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smarcc1P97496 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smarcc1P97496 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC9.38□□□□□ -0.91
Smarcc1P97496 Gm44227-201ENSMUST00000203576 241 ntBASIC9.38□□□□□ -0.91
Smarcc1P97496 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smarcc1P97496 AC144783.1-201ENSMUST00000219103 960 ntBASIC9.38□□□□□ -0.91
Smarcc1P97496 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC9.38□□□□□ -0.91
Smarcc1P97496 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smarcc1P97496 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC9.38□□□□□ -0.91
Smarcc1P97496 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smarcc1P97496 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC9.38□□□□□ -0.91
Smarcc1P97496 BC048644-201ENSMUST00000140928 3522 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smarcc1P97496 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Smarcc1P97496 Adam18-201ENSMUST00000033957 2361 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smarcc1P97496 Gm10069-201ENSMUST00000144745 3694 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smarcc1P97496 AC158686.1-201ENSMUST00000218068 2332 ntBASIC9.38□□□□□ -0.91
Smarcc1P97496 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Smarcc1P97496 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Smarcc1P97496 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smarcc1P97496 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smarcc1P97496 Tcp10a-204ENSMUST00000138222 1838 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Smarcc1P97496 Gm15990-201ENSMUST00000132223 3321 ntTSL 5 BASIC9.38□□□□□ -0.91
Smarcc1P97496 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC9.37□□□□□ -0.91
Smarcc1P97496 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Smarcc1P97496 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms