Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CiitaP79621 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CiitaP79621 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CiitaP79621 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
CiitaP79621 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
CiitaP79621 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
CiitaP79621 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
CiitaP79621 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CiitaP79621 Gm5752-201ENSMUST00000117771 594 ntBASIC8.03□□□□□ -1.12
CiitaP79621 Gm15538-201ENSMUST00000121410 313 ntBASIC8.03□□□□□ -1.12
CiitaP79621 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
CiitaP79621 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CiitaP79621 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC8.03□□□□□ -1.12
CiitaP79621 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC8.03□□□□□ -1.12
CiitaP79621 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CiitaP79621 Gm17205-201ENSMUST00000168370 1207 ntBASIC8.03□□□□□ -1.12
CiitaP79621 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
CiitaP79621 Gm5272-201ENSMUST00000182730 982 ntBASIC8.03□□□□□ -1.12
CiitaP79621 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
CiitaP79621 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
CiitaP79621 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC8.03□□□□□ -1.12
CiitaP79621 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC8.03□□□□□ -1.12
CiitaP79621 Gm18562-201ENSMUST00000209949 915 ntBASIC8.03□□□□□ -1.12
CiitaP79621 Gm18860-201ENSMUST00000212029 764 ntBASIC8.03□□□□□ -1.12
CiitaP79621 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC8.03□□□□□ -1.12
CiitaP79621 Gm8275-201ENSMUST00000219732 424 ntBASIC8.03□□□□□ -1.12
CiitaP79621 Gm17611-202ENSMUST00000220613 814 ntBASIC8.03□□□□□ -1.12
CiitaP79621 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC8.03□□□□□ -1.12
CiitaP79621 AC157212.1-201ENSMUST00000228398 1075 ntBASIC8.03□□□□□ -1.12
CiitaP79621 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CiitaP79621 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
CiitaP79621 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
CiitaP79621 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
CiitaP79621 Gm44093-201ENSMUST00000204381 1802 ntBASIC8.03□□□□□ -1.12
CiitaP79621 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CiitaP79621 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
CiitaP79621 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CiitaP79621 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
CiitaP79621 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
CiitaP79621 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
CiitaP79621 AC107452.3-201ENSMUST00000228807 1308 ntBASIC8.03□□□□□ -1.12
CiitaP79621 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CiitaP79621 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
CiitaP79621 Gm6820-201ENSMUST00000188803 2173 ntBASIC8.03□□□□□ -1.12
CiitaP79621 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.12
CiitaP79621 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
CiitaP79621 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
CiitaP79621 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
CiitaP79621 AC153152.1-201ENSMUST00000221105 2742 ntBASIC8.02□□□□□ -1.12
CiitaP79621 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.12
CiitaP79621 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
CiitaP79621 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC8.02□□□□□ -1.12
CiitaP79621 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
CiitaP79621 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
CiitaP79621 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.12
CiitaP79621 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CiitaP79621 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CiitaP79621 Gm18305-201ENSMUST00000216532 2128 ntBASIC8.02□□□□□ -1.13
CiitaP79621 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CiitaP79621 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CiitaP79621 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CiitaP79621 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC8.02□□□□□ -1.13
CiitaP79621 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CiitaP79621 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CiitaP79621 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CiitaP79621 Gm11864-201ENSMUST00000116179 1220 ntBASIC8.02□□□□□ -1.13
CiitaP79621 Gm15422-201ENSMUST00000117453 541 ntBASIC8.02□□□□□ -1.13
CiitaP79621 Gm11893-201ENSMUST00000117829 491 ntBASIC8.02□□□□□ -1.13
CiitaP79621 Gm11653-201ENSMUST00000119992 1009 ntBASIC8.02□□□□□ -1.13
CiitaP79621 Gm16330-201ENSMUST00000128324 297 ntBASIC8.02□□□□□ -1.13
CiitaP79621 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC8.02□□□□□ -1.13
CiitaP79621 Gm3208-201ENSMUST00000168281 427 ntBASIC8.02□□□□□ -1.13
CiitaP79621 Gm22702-201ENSMUST00000175372 69 ntBASIC8.02□□□□□ -1.13
CiitaP79621 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CiitaP79621 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CiitaP79621 Gm18848-201ENSMUST00000182069 792 ntBASIC8.02□□□□□ -1.13
CiitaP79621 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC8.02□□□□□ -1.13
CiitaP79621 Gm36928-201ENSMUST00000192466 694 ntBASIC8.02□□□□□ -1.13
CiitaP79621 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC8.02□□□□□ -1.13
CiitaP79621 Gm37325-201ENSMUST00000194971 694 ntBASIC8.02□□□□□ -1.13
CiitaP79621 Gm42804-201ENSMUST00000199701 178 ntBASIC8.02□□□□□ -1.13
CiitaP79621 Gm42584-201ENSMUST00000201404 220 ntBASIC8.02□□□□□ -1.13
CiitaP79621 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC8.02□□□□□ -1.13
CiitaP79621 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CiitaP79621 Gm20136-201ENSMUST00000207501 891 ntBASIC8.02□□□□□ -1.13
CiitaP79621 Gm18559-201ENSMUST00000208249 604 ntBASIC8.02□□□□□ -1.13
CiitaP79621 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC8.02□□□□□ -1.13
CiitaP79621 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC8.02□□□□□ -1.13
CiitaP79621 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC8.02□□□□□ -1.13
CiitaP79621 AC124778.1-201ENSMUST00000216013 162 ntBASIC8.02□□□□□ -1.13
CiitaP79621 AC127224.1-201ENSMUST00000218094 453 ntBASIC8.02□□□□□ -1.13
CiitaP79621 AC151901.1-201ENSMUST00000218274 180 ntBASIC8.02□□□□□ -1.13
CiitaP79621 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC8.02□□□□□ -1.13
CiitaP79621 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CiitaP79621 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CiitaP79621 Gm37663-201ENSMUST00000191887 2299 ntBASIC8.02□□□□□ -1.13
CiitaP79621 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC8.02□□□□□ -1.13
CiitaP79621 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CiitaP79621 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CiitaP79621 Gm43099-201ENSMUST00000198943 5241 ntBASIC8.02□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms