Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Rian-209ENSMUST00000182406 3476 ntBASIC8.46□□□□□ -1.06
Hmgb1P63158 AC158986.1-201ENSMUST00000228391 3455 ntBASIC8.46□□□□□ -1.06
Hmgb1P63158 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Hmgb1P63158 Gm37959-201ENSMUST00000191700 2897 ntBASIC8.46□□□□□ -1.06
Hmgb1P63158 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Hmgb1P63158 Gm45634-201ENSMUST00000209736 1990 ntBASIC8.46□□□□□ -1.06
Hmgb1P63158 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Hmgb1P63158 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Hmgb1P63158 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC8.46□□□□□ -1.06
Hmgb1P63158 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Hmgb1P63158 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Hmgb1P63158 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.06
Hmgb1P63158 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Hmgb1P63158 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Hmgb1P63158 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Hmgb1P63158 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
Hmgb1P63158 Gm44777-201ENSMUST00000205941 4052 ntBASIC8.45□□□□□ -1.06
Hmgb1P63158 Aldh18a1-207ENSMUST00000176939 3427 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Hmgb1P63158 Gm44286-201ENSMUST00000204098 1487 ntBASIC8.45□□□□□ -1.06
Hmgb1P63158 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Hmgb1P63158 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
Hmgb1P63158 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Hmgb1P63158 Gm43880-201ENSMUST00000203635 2162 ntBASIC8.45□□□□□ -1.06
Hmgb1P63158 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Hmgb1P63158 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
Hmgb1P63158 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC8.45□□□□□ -1.06
Hmgb1P63158 Gm42679-201ENSMUST00000197086 2906 ntBASIC8.45□□□□□ -1.06
Hmgb1P63158 Gm37518-201ENSMUST00000194930 2603 ntBASIC8.45□□□□□ -1.06
Hmgb1P63158 Gm6786-201ENSMUST00000203165 1915 ntBASIC8.45□□□□□ -1.06
Hmgb1P63158 Gm37951-201ENSMUST00000192963 3032 ntBASIC8.45□□□□□ -1.06
Hmgb1P63158 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Hmgb1P63158 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Hmgb1P63158 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Hmgb1P63158 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC8.45□□□□□ -1.06
Hmgb1P63158 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Hmgb1P63158 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Hmgb1P63158 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Hmgb1P63158 Gm12838-201ENSMUST00000116278 325 ntBASIC8.45□□□□□ -1.06
Hmgb1P63158 Gm14450-201ENSMUST00000119984 240 ntBASIC8.45□□□□□ -1.06
Hmgb1P63158 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC8.45□□□□□ -1.06
Hmgb1P63158 Gm25842-201ENSMUST00000122590 322 ntBASIC8.45□□□□□ -1.06
Hmgb1P63158 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC8.45□□□□□ -1.06
Hmgb1P63158 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC8.45□□□□□ -1.06
Hmgb1P63158 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC8.45□□□□□ -1.06
Hmgb1P63158 Gm23094-201ENSMUST00000157551 322 ntBASIC8.45□□□□□ -1.06
Hmgb1P63158 Csnk2b-203ENSMUST00000173114 917 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Hmgb1P63158 Gm24824-201ENSMUST00000175097 78 ntBASIC8.45□□□□□ -1.06
Hmgb1P63158 Vmn2r-ps31-201ENSMUST00000176474 760 ntBASIC8.45□□□□□ -1.06
Hmgb1P63158 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Hmgb1P63158 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC8.45□□□□□ -1.06
Hmgb1P63158 D7Ertd128e-201ENSMUST00000189744 928 ntTSL 2 BASIC8.45□□□□□ -1.06
Hmgb1P63158 Fxyd4-208ENSMUST00000204950 586 ntTSL 3 BASIC8.45□□□□□ -1.06
Hmgb1P63158 Mcee-204ENSMUST00000206882 391 ntTSL 2 BASIC8.45□□□□□ -1.06
Hmgb1P63158 Gm44809-201ENSMUST00000208305 993 ntBASIC8.45□□□□□ -1.06
Hmgb1P63158 Gm45800-201ENSMUST00000210331 700 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Hmgb1P63158 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC8.45□□□□□ -1.06
Hmgb1P63158 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC8.45□□□□□ -1.06
Hmgb1P63158 Gm5590-201ENSMUST00000059110 345 ntBASIC8.45□□□□□ -1.06
Hmgb1P63158 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Hmgb1P63158 Olfr155-201ENSMUST00000095108 1172 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Hmgb1P63158 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Hmgb1P63158 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Hmgb1P63158 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Hmgb1P63158 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Hmgb1P63158 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Hmgb1P63158 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC8.45□□□□□ -1.06
Hmgb1P63158 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Hmgb1P63158 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC8.45□□□□□ -1.06
Hmgb1P63158 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Hmgb1P63158 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Hmgb1P63158 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
Hmgb1P63158 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Hmgb1P63158 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Hmgb1P63158 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Hmgb1P63158 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Hmgb1P63158 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Hmgb1P63158 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Hmgb1P63158 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Hmgb1P63158 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Hmgb1P63158 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Hmgb1P63158 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Hmgb1P63158 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Hmgb1P63158 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC8.44□□□□□ -1.06
Hmgb1P63158 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Hmgb1P63158 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Hmgb1P63158 Mir467f-201ENSMUST00000116923 120 ntBASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm14824-201ENSMUST00000119421 737 ntBASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm14788-201ENSMUST00000119457 375 ntBASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm13683-201ENSMUST00000119497 1076 ntBASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm12993-201ENSMUST00000119900 479 ntBASIC8.44□□□□□ -1.06
Hmgb1P63158 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm40614-201ENSMUST00000125161 1254 ntTSL 5 BASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm8865-201ENSMUST00000125697 430 ntBASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC8.44□□□□□ -1.06
Hmgb1P63158 Dtx3-205ENSMUST00000137151 346 ntTSL 3 BASIC8.44□□□□□ -1.06
Hmgb1P63158 1700034H15Rik-205ENSMUST00000154116 926 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm6465-201ENSMUST00000168154 1098 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm26436-201ENSMUST00000180325 132 ntBASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm27288-201ENSMUST00000184215 80 ntBASIC8.44□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms