Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 AC192091.1-201ENSMUST00000218668 439 ntBASIC7.91□□□□□ -1.14
NcanP55066 AC131029.2-201ENSMUST00000226696 628 ntBASIC7.91□□□□□ -1.14
NcanP55066 AC105324.1-201ENSMUST00000227844 386 ntBASIC7.91□□□□□ -1.14
NcanP55066 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NcanP55066 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC7.91□□□□□ -1.14
NcanP55066 Gm2a-201ENSMUST00000000608 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NcanP55066 Ikbkg-202ENSMUST00000064407 4530 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
NcanP55066 Igf1r-201ENSMUST00000005671 11409 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NcanP55066 Gm37200-201ENSMUST00000193689 2172 ntBASIC7.91□□□□□ -1.14
NcanP55066 Gm8464-201ENSMUST00000140208 2200 ntBASIC7.91□□□□□ -1.14
NcanP55066 Gm4750-202ENSMUST00000152262 2200 ntBASIC7.91□□□□□ -1.14
NcanP55066 Gm37080-201ENSMUST00000194804 2404 ntBASIC7.91□□□□□ -1.14
NcanP55066 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
NcanP55066 Nbr1-207ENSMUST00000107218 3353 ntAPPRIS P3 TSL 5 BASIC7.91□□□□□ -1.14
NcanP55066 D630045J12Rik-206ENSMUST00000169256 10968 ntAPPRIS P2 TSL 5 BASIC7.91□□□□□ -1.14
NcanP55066 Paqr8-201ENSMUST00000068880 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NcanP55066 Zfp827-202ENSMUST00000098614 7581 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
NcanP55066 Sptbn1-201ENSMUST00000006629 8461 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
NcanP55066 Itsn1-208ENSMUST00000114002 14012 ntAPPRIS P2 TSL 5 BASIC7.9□□□□□ -1.14
NcanP55066 C79130-201ENSMUST00000199610 4296 ntBASIC7.9□□□□□ -1.14
NcanP55066 Sap130-201ENSMUST00000025109 4015 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
NcanP55066 Celf2-223ENSMUST00000182851 3587 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
NcanP55066 Umps-201ENSMUST00000023510 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NcanP55066 Gm43612-201ENSMUST00000196087 3207 ntBASIC7.9□□□□□ -1.14
NcanP55066 Onecut2-201ENSMUST00000115145 13389 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
NcanP55066 Onecut2-202ENSMUST00000175965 13391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
NcanP55066 Gm38173-201ENSMUST00000193126 2314 ntBASIC7.9□□□□□ -1.14
NcanP55066 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
NcanP55066 Pcm1-201ENSMUST00000045218 6624 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
NcanP55066 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
NcanP55066 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
NcanP55066 Npr3-204ENSMUST00000228489 1969 ntBASIC7.9□□□□□ -1.14
NcanP55066 Paics-202ENSMUST00000117536 1862 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
NcanP55066 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC7.9□□□□□ -1.14
NcanP55066 Gm12608-201ENSMUST00000122013 1715 ntBASIC7.9□□□□□ -1.14
NcanP55066 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
NcanP55066 Serpina1a-201ENSMUST00000072876 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
NcanP55066 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC7.9□□□□□ -1.14
NcanP55066 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
NcanP55066 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC7.9□□□□□ -1.14
NcanP55066 Gimap4-201ENSMUST00000067506 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
NcanP55066 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
NcanP55066 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
NcanP55066 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
NcanP55066 Gm23311-201ENSMUST00000104152 134 ntBASIC7.9□□□□□ -1.14
NcanP55066 Gm15616-201ENSMUST00000118662 375 ntBASIC7.9□□□□□ -1.14
NcanP55066 Gm12778-201ENSMUST00000122341 333 ntBASIC7.9□□□□□ -1.14
NcanP55066 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC7.9□□□□□ -1.14
NcanP55066 Lrrc32-201ENSMUST00000165205 3817 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
NcanP55066 Mir6926-201ENSMUST00000184562 68 ntBASIC7.9□□□□□ -1.14
NcanP55066 Gm5261-201ENSMUST00000185860 713 ntBASIC7.9□□□□□ -1.14
NcanP55066 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC7.9□□□□□ -1.14
NcanP55066 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
NcanP55066 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC7.9□□□□□ -1.14
NcanP55066 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
NcanP55066 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC7.9□□□□□ -1.14
NcanP55066 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
NcanP55066 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
NcanP55066 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC7.9□□□□□ -1.14
NcanP55066 Gm18797-201ENSMUST00000190809 1174 ntBASIC7.9□□□□□ -1.14
NcanP55066 Gm42752-201ENSMUST00000198394 1106 ntBASIC7.9□□□□□ -1.14
NcanP55066 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC7.9□□□□□ -1.14
NcanP55066 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC7.9□□□□□ -1.14
NcanP55066 Gm4808-201ENSMUST00000222283 1203 ntBASIC7.9□□□□□ -1.14
NcanP55066 AC165155.1-201ENSMUST00000228932 445 ntBASIC7.9□□□□□ -1.14
NcanP55066 Morc2b-201ENSMUST00000053896 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NcanP55066 Fto-201ENSMUST00000069718 3564 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NcanP55066 Exoc5-207ENSMUST00000162175 12699 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NcanP55066 Rcbtb2-218ENSMUST00000169479 3351 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
NcanP55066 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
NcanP55066 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
NcanP55066 Gm37304-201ENSMUST00000193833 2886 ntBASIC7.9□□□□□ -1.15
NcanP55066 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
NcanP55066 Dock9-206ENSMUST00000212181 7368 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
NcanP55066 Bdnf-202ENSMUST00000111042 3905 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
NcanP55066 Prkrip1-204ENSMUST00000151786 3893 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
NcanP55066 Kif1b-201ENSMUST00000030806 6991 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
NcanP55066 Serpina3f-202ENSMUST00000121337 2248 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
NcanP55066 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.15
NcanP55066 Grb10-203ENSMUST00000109654 4755 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
NcanP55066 2900026A02Rik-202ENSMUST00000211733 10238 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
NcanP55066 Sox6-206ENSMUST00000205405 2903 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
NcanP55066 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC7.89□□□□□ -1.15
NcanP55066 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NcanP55066 Grm8-201ENSMUST00000090512 2830 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NcanP55066 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
NcanP55066 Nol12-203ENSMUST00000138880 3717 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NcanP55066 Alpk1-201ENSMUST00000029662 4795 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
NcanP55066 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NcanP55066 AC187103.1-201ENSMUST00000224641 1475 ntBASIC7.89□□□□□ -1.15
NcanP55066 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NcanP55066 Pik3cg-205ENSMUST00000217915 3340 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
NcanP55066 Zfp871-202ENSMUST00000159086 5111 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
NcanP55066 Ccdc14-201ENSMUST00000023532 4107 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NcanP55066 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NcanP55066 Gm38288-201ENSMUST00000195330 1320 ntBASIC7.89□□□□□ -1.15
NcanP55066 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
NcanP55066 Slmapos2-201ENSMUST00000160089 2194 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
NcanP55066 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
NcanP55066 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms