Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox3P53784 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Sox3P53784 Gm37790-201ENSMUST00000193136 3346 ntBASIC7.14□□□□□ -1.27
Sox3P53784 Gm37372-201ENSMUST00000193577 3311 ntBASIC7.14□□□□□ -1.27
Sox3P53784 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Sox3P53784 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox3P53784 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Sox3P53784 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox3P53784 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC7.13□□□□□ -1.27
Sox3P53784 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sox3P53784 Grik1-210ENSMUST00000228034 2708 ntBASIC7.13□□□□□ -1.27
Sox3P53784 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox3P53784 Gm11342-203ENSMUST00000224879 1324 ntBASIC7.13□□□□□ -1.27
Sox3P53784 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox3P53784 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC7.13□□□□□ -1.27
Sox3P53784 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC7.13□□□□□ -1.27
Sox3P53784 Gm26025-201ENSMUST00000158655 271 ntBASIC7.13□□□□□ -1.27
Sox3P53784 Gm7244-201ENSMUST00000164658 455 ntBASIC7.13□□□□□ -1.27
Sox3P53784 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC7.13□□□□□ -1.27
Sox3P53784 Gm6838-201ENSMUST00000172851 582 ntBASIC7.13□□□□□ -1.27
Sox3P53784 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC7.13□□□□□ -1.27
Sox3P53784 Gm28580-201ENSMUST00000186767 88 ntBASIC7.13□□□□□ -1.27
Sox3P53784 Gm7560-201ENSMUST00000187748 873 ntBASIC7.13□□□□□ -1.27
Sox3P53784 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sox3P53784 Gm37383-201ENSMUST00000191750 745 ntBASIC7.13□□□□□ -1.27
Sox3P53784 AC099760.1-201ENSMUST00000196300 153 ntBASIC7.13□□□□□ -1.27
Sox3P53784 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Sox3P53784 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Sox3P53784 Gm43558-201ENSMUST00000200155 210 ntBASIC7.13□□□□□ -1.27
Sox3P53784 Gm4585-201ENSMUST00000207218 452 ntBASIC7.13□□□□□ -1.27
Sox3P53784 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC7.13□□□□□ -1.27
Sox3P53784 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC7.13□□□□□ -1.27
Sox3P53784 CT009711.2-202ENSMUST00000224538 973 ntBASIC7.13□□□□□ -1.27
Sox3P53784 AC107452.2-201ENSMUST00000228415 363 ntBASIC7.13□□□□□ -1.27
Sox3P53784 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Sox3P53784 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sox3P53784 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Sox3P53784 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
Sox3P53784 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox3P53784 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sox3P53784 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox3P53784 AC151984.1-201ENSMUST00000218261 2976 ntBASIC7.13□□□□□ -1.27
Sox3P53784 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox3P53784 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox3P53784 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox3P53784 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox3P53784 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox3P53784 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sox3P53784 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Sox3P53784 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox3P53784 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox3P53784 Gm44117-201ENSMUST00000204442 1758 ntBASIC7.13□□□□□ -1.27
Sox3P53784 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox3P53784 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Sox3P53784 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Sox3P53784 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox3P53784 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox3P53784 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Sox3P53784 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Sox3P53784 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Sox3P53784 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
Sox3P53784 AC124675.1-201ENSMUST00000226263 1390 ntBASIC7.12□□□□□ -1.27
Sox3P53784 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox3P53784 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox3P53784 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox3P53784 Mir680-1-201ENSMUST00000102257 109 ntBASIC7.12□□□□□ -1.27
Sox3P53784 Gm22438-201ENSMUST00000104049 132 ntBASIC7.12□□□□□ -1.27
Sox3P53784 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
Sox3P53784 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sox3P53784 Gm13252-201ENSMUST00000119355 321 ntBASIC7.12□□□□□ -1.27
Sox3P53784 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC7.12□□□□□ -1.27
Sox3P53784 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sox3P53784 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC7.12□□□□□ -1.27
Sox3P53784 Gm24530-201ENSMUST00000157948 288 ntBASIC7.12□□□□□ -1.27
Sox3P53784 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC7.12□□□□□ -1.27
Sox3P53784 Gm3344-201ENSMUST00000169610 603 ntBASIC7.12□□□□□ -1.27
Sox3P53784 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
Sox3P53784 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
Sox3P53784 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
Sox3P53784 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
Sox3P53784 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sox3P53784 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
Sox3P53784 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
Sox3P53784 Gm27542-201ENSMUST00000184184 256 ntBASIC7.12□□□□□ -1.27
Sox3P53784 Gm6472-202ENSMUST00000187973 582 ntBASIC7.12□□□□□ -1.27
Sox3P53784 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC7.12□□□□□ -1.27
Sox3P53784 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC7.12□□□□□ -1.27
Sox3P53784 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC7.12□□□□□ -1.27
Sox3P53784 Gm30270-201ENSMUST00000202675 524 ntTSL 2 BASIC7.12□□□□□ -1.27
Sox3P53784 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC7.12□□□□□ -1.27
Sox3P53784 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox3P53784 Gm44856-201ENSMUST00000206639 304 ntBASIC7.12□□□□□ -1.27
Sox3P53784 Gm45900-201ENSMUST00000211879 409 ntBASIC7.12□□□□□ -1.27
Sox3P53784 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC7.12□□□□□ -1.27
Sox3P53784 AC163651.1-201ENSMUST00000222500 372 ntBASIC7.12□□□□□ -1.27
Sox3P53784 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox3P53784 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox3P53784 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox3P53784 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Sox3P53784 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms