Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chd1P40201 Drosha-201ENSMUST00000090292 4519 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd1P40201 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Chd1P40201 Gm37785-201ENSMUST00000195783 2408 ntBASIC10.88□□□□□ -0.67
Chd1P40201 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Chd1P40201 Mamdc4-201ENSMUST00000095117 3990 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Chd1P40201 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC10.88□□□□□ -0.67
Chd1P40201 Gm44101-201ENSMUST00000203951 2221 ntBASIC10.88□□□□□ -0.67
Chd1P40201 Lmod1-201ENSMUST00000059352 3948 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd1P40201 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd1P40201 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Chd1P40201 Tbc1d14-215ENSMUST00000146430 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd1P40201 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd1P40201 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd1P40201 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd1P40201 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd1P40201 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd1P40201 Wdpcp-201ENSMUST00000020568 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd1P40201 Gm12307-201ENSMUST00000120581 590 ntBASIC10.87□□□□□ -0.67
Chd1P40201 Gm15959-201ENSMUST00000121724 368 ntBASIC10.87□□□□□ -0.67
Chd1P40201 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chd1P40201 Gm26729-201ENSMUST00000180744 352 ntBASIC10.87□□□□□ -0.67
Chd1P40201 AC151904.3-201ENSMUST00000219266 895 ntBASIC10.87□□□□□ -0.67
Chd1P40201 AC138329.1-201ENSMUST00000225040 471 ntBASIC10.87□□□□□ -0.67
Chd1P40201 AC132260.1-201ENSMUST00000225499 734 ntBASIC10.87□□□□□ -0.67
Chd1P40201 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd1P40201 Gm10205-201ENSMUST00000087431 234 ntBASIC10.87□□□□□ -0.67
Chd1P40201 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd1P40201 Palb2-202ENSMUST00000098068 3750 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd1P40201 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Chd1P40201 Mertk-201ENSMUST00000014505 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd1P40201 Ccdc77-201ENSMUST00000032283 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd1P40201 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chd1P40201 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chd1P40201 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chd1P40201 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Chd1P40201 Clcn7-201ENSMUST00000040729 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd1P40201 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd1P40201 Ogdhl-203ENSMUST00000228529 3723 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Chd1P40201 AC022775.1-201ENSMUST00000228163 2698 ntBASIC10.87□□□□□ -0.67
Chd1P40201 Foxp2-205ENSMUST00000115474 2544 ntTSL 5 BASIC10.87□□□□□ -0.67
Chd1P40201 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Chd1P40201 Oacyl-201ENSMUST00000115097 3431 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd1P40201 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Chd1P40201 Gm22371-201ENSMUST00000104588 130 ntBASIC10.87□□□□□ -0.67
Chd1P40201 Gm15502-201ENSMUST00000121449 208 ntBASIC10.87□□□□□ -0.67
Chd1P40201 Gm22024-201ENSMUST00000122733 287 ntBASIC10.87□□□□□ -0.67
Chd1P40201 Gm7152-201ENSMUST00000163570 605 ntBASIC10.87□□□□□ -0.67
Chd1P40201 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC10.87□□□□□ -0.67
Chd1P40201 Gm27299-201ENSMUST00000184593 103 ntBASIC10.87□□□□□ -0.67
Chd1P40201 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chd1P40201 Gm36993-201ENSMUST00000192983 2980 ntBASIC10.87□□□□□ -0.67
Chd1P40201 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Chd1P40201 Kif13b-203ENSMUST00000224503 8865 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Chd1P40201 1700006J14Rik-203ENSMUST00000160091 2629 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chd1P40201 AC159379.2-201ENSMUST00000220244 2482 ntBASIC10.86□□□□□ -0.67
Chd1P40201 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd1P40201 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd1P40201 Aloxe3-201ENSMUST00000021268 3019 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd1P40201 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd1P40201 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd1P40201 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC10.86□□□□□ -0.67
Chd1P40201 Gm9226-201ENSMUST00000188352 3489 ntBASIC10.86□□□□□ -0.67
Chd1P40201 Gm21152-201ENSMUST00000190271 3483 ntBASIC10.86□□□□□ -0.67
Chd1P40201 Gm24434-201ENSMUST00000104081 132 ntBASIC10.86□□□□□ -0.67
Chd1P40201 Gm13983-201ENSMUST00000118018 865 ntBASIC10.86□□□□□ -0.67
Chd1P40201 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Chd1P40201 Gm14805-201ENSMUST00000120172 340 ntBASIC10.86□□□□□ -0.67
Chd1P40201 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chd1P40201 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chd1P40201 Gm44566-201ENSMUST00000207638 304 ntBASIC10.86□□□□□ -0.67
Chd1P40201 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC10.86□□□□□ -0.67
Chd1P40201 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC10.86□□□□□ -0.67
Chd1P40201 AC132587.1-201ENSMUST00000220562 166 ntBASIC10.86□□□□□ -0.67
Chd1P40201 AC113031.1-201ENSMUST00000227400 432 ntBASIC10.86□□□□□ -0.67
Chd1P40201 Gm6776-201ENSMUST00000057752 900 ntBASIC10.86□□□□□ -0.67
Chd1P40201 Meis1-201ENSMUST00000068264 3196 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd1P40201 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd1P40201 6820431F20Rik-202ENSMUST00000153748 4659 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chd1P40201 Gria4-201ENSMUST00000027020 5441 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Chd1P40201 Gm37150-201ENSMUST00000193900 2754 ntBASIC10.86□□□□□ -0.67
Chd1P40201 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chd1P40201 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd1P40201 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Chd1P40201 Acsl1-203ENSMUST00000110372 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd1P40201 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd1P40201 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC10.85□□□□□ -0.67
Chd1P40201 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chd1P40201 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chd1P40201 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd1P40201 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chd1P40201 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Chd1P40201 Itgam-201ENSMUST00000064821 4682 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Chd1P40201 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Chd1P40201 Arhgap6-205ENSMUST00000112131 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd1P40201 Gm37161-201ENSMUST00000191994 2697 ntBASIC10.85□□□□□ -0.67
Chd1P40201 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd1P40201 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Chd1P40201 Gm14893-201ENSMUST00000117904 282 ntBASIC10.85□□□□□ -0.67
Chd1P40201 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms