Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Nup155-201ENSMUST00000163765 6402 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col2a1P28481 Gm28370-201ENSMUST00000185303 3375 ntTSL 5 BASIC8.29□□□□□ -1.08
Col2a1P28481 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Col2a1P28481 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC8.29□□□□□ -1.08
Col2a1P28481 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col2a1P28481 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC8.29□□□□□ -1.08
Col2a1P28481 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Col2a1P28481 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Col2a1P28481 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Col2a1P28481 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Col2a1P28481 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC8.29□□□□□ -1.08
Col2a1P28481 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Col2a1P28481 Gm25969-201ENSMUST00000157166 132 ntBASIC8.29□□□□□ -1.08
Col2a1P28481 Gm18699-201ENSMUST00000190713 243 ntBASIC8.29□□□□□ -1.08
Col2a1P28481 Gm37669-201ENSMUST00000192184 820 ntBASIC8.29□□□□□ -1.08
Col2a1P28481 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC8.29□□□□□ -1.08
Col2a1P28481 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Col2a1P28481 Gm9800-201ENSMUST00000052615 336 ntBASIC8.29□□□□□ -1.08
Col2a1P28481 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Col2a1P28481 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col2a1P28481 Olfr484-202ENSMUST00000214722 4676 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Col2a1P28481 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Col2a1P28481 Gm10568-201ENSMUST00000193244 1634 ntBASIC8.29□□□□□ -1.08
Col2a1P28481 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col2a1P28481 Rora-201ENSMUST00000034766 10878 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Col2a1P28481 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Col2a1P28481 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col2a1P28481 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col2a1P28481 Gm37080-201ENSMUST00000194804 2404 ntBASIC8.29□□□□□ -1.08
Col2a1P28481 Myt1-201ENSMUST00000081125 5327 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col2a1P28481 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col2a1P28481 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
Col2a1P28481 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Col2a1P28481 Gm7694-201ENSMUST00000179801 3827 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Col2a1P28481 Pcdh15-216ENSMUST00000131724 6322 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Col2a1P28481 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Col2a1P28481 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col2a1P28481 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col2a1P28481 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Col2a1P28481 Pcm1-201ENSMUST00000045218 6624 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col2a1P28481 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Col2a1P28481 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Col2a1P28481 Gm26416-201ENSMUST00000104280 134 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm13352-201ENSMUST00000117515 262 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm12375-201ENSMUST00000119331 921 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC8.28□□□□□ -1.08
Col2a1P28481 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col2a1P28481 Gm3585-201ENSMUST00000173438 875 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Col2a1P28481 Gm29048-201ENSMUST00000185342 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm29403-201ENSMUST00000185491 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28234-201ENSMUST00000185657 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28248-201ENSMUST00000186093 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm29633-202ENSMUST00000186217 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28829-201ENSMUST00000186231 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28261-201ENSMUST00000186417 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28815-201ENSMUST00000186751 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28608-201ENSMUST00000186860 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28122-201ENSMUST00000187088 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28420-201ENSMUST00000187340 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28106-201ENSMUST00000187640 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28698-201ENSMUST00000187734 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm29224-201ENSMUST00000187965 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm29189-201ENSMUST00000188018 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm29476-201ENSMUST00000188397 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm29505-201ENSMUST00000188424 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28125-201ENSMUST00000188470 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm29391-201ENSMUST00000188545 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm29280-201ENSMUST00000188571 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28349-201ENSMUST00000188590 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm29652-201ENSMUST00000188622 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28819-206ENSMUST00000188816 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm29079-201ENSMUST00000188875 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28213-201ENSMUST00000189183 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm29382-201ENSMUST00000189549 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm29377-205ENSMUST00000189603 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28327-201ENSMUST00000189638 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28790-201ENSMUST00000189642 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28907-201ENSMUST00000189700 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm29586-207ENSMUST00000189745 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm29115-201ENSMUST00000189870 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28366-201ENSMUST00000190147 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm29212-201ENSMUST00000190384 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm29533-201ENSMUST00000190403 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28162-201ENSMUST00000190545 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm29030-201ENSMUST00000190848 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28742-201ENSMUST00000191001 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28899-201ENSMUST00000191161 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm29567-201ENSMUST00000191188 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28222-201ENSMUST00000191210 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28776-201ENSMUST00000191282 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm29306-201ENSMUST00000191366 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm29618-201ENSMUST00000191423 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28136-210ENSMUST00000191432 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm29251-201ENSMUST00000191480 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28658-201ENSMUST00000191532 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm32180-201ENSMUST00000192415 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm30598-201ENSMUST00000192620 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm37322-201ENSMUST00000193409 337 ntBASIC8.28□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms