Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC8.01□□□□□ -1.13
Chmp6P0C0A3 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Chmp6P0C0A3 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Chmp6P0C0A3 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Chmp6P0C0A3 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Chmp6P0C0A3 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Chmp6P0C0A3 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Chmp6P0C0A3 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC8.01□□□□□ -1.13
Chmp6P0C0A3 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Chmp6P0C0A3 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
Chmp6P0C0A3 Gm38288-201ENSMUST00000195330 1320 ntBASIC8.01□□□□□ -1.13
Chmp6P0C0A3 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Chmp6P0C0A3 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Chmp6P0C0A3 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC8.01□□□□□ -1.13
Chmp6P0C0A3 Gm10623-201ENSMUST00000209081 2639 ntBASIC8□□□□□ -1.13
Chmp6P0C0A3 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Chmp6P0C0A3 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Chmp6P0C0A3 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC8□□□□□ -1.13
Chmp6P0C0A3 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC8□□□□□ -1.13
Chmp6P0C0A3 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC8□□□□□ -1.13
Chmp6P0C0A3 Gm37618-201ENSMUST00000192891 3075 ntBASIC8□□□□□ -1.13
Chmp6P0C0A3 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Chmp6P0C0A3 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Chmp6P0C0A3 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC8□□□□□ -1.13
Chmp6P0C0A3 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Chmp6P0C0A3 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Chmp6P0C0A3 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Chmp6P0C0A3 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Chmp6P0C0A3 Gm23834-201ENSMUST00000104436 129 ntBASIC8□□□□□ -1.13
Chmp6P0C0A3 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
Chmp6P0C0A3 Gm14480-201ENSMUST00000118521 433 ntBASIC8□□□□□ -1.13
Chmp6P0C0A3 Gm15047-201ENSMUST00000118891 454 ntBASIC8□□□□□ -1.13
Chmp6P0C0A3 Gm11383-201ENSMUST00000121346 807 ntBASIC8□□□□□ -1.13
Chmp6P0C0A3 Gm24893-201ENSMUST00000122745 369 ntBASIC8□□□□□ -1.13
Chmp6P0C0A3 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC8□□□□□ -1.13
Chmp6P0C0A3 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC8□□□□□ -1.13
Chmp6P0C0A3 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC8□□□□□ -1.13
Chmp6P0C0A3 Gm17973-201ENSMUST00000174509 520 ntBASIC8□□□□□ -1.13
Chmp6P0C0A3 Gm28164-201ENSMUST00000190143 442 ntBASIC8□□□□□ -1.13
Chmp6P0C0A3 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC8□□□□□ -1.13
Chmp6P0C0A3 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC8□□□□□ -1.13
Chmp6P0C0A3 Gm43558-201ENSMUST00000200155 210 ntBASIC8□□□□□ -1.13
Chmp6P0C0A3 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC8□□□□□ -1.13
Chmp6P0C0A3 Gm43812-202ENSMUST00000202701 581 ntBASIC8□□□□□ -1.13
Chmp6P0C0A3 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC8□□□□□ -1.13
Chmp6P0C0A3 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC8□□□□□ -1.13
Chmp6P0C0A3 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC8□□□□□ -1.13
Chmp6P0C0A3 AC160338.3-201ENSMUST00000214836 384 ntBASIC8□□□□□ -1.13
Chmp6P0C0A3 AC164424.3-201ENSMUST00000220809 148 ntBASIC8□□□□□ -1.13
Chmp6P0C0A3 AC166358.8-201ENSMUST00000223288 105 ntBASIC8□□□□□ -1.13
Chmp6P0C0A3 AC124739.1-201ENSMUST00000223433 148 ntBASIC8□□□□□ -1.13
Chmp6P0C0A3 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Chmp6P0C0A3 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Chmp6P0C0A3 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC8□□□□□ -1.13
Chmp6P0C0A3 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Chmp6P0C0A3 Gm37420-201ENSMUST00000195332 2912 ntBASIC8□□□□□ -1.13
Chmp6P0C0A3 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Chmp6P0C0A3 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Chmp6P0C0A3 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC8□□□□□ -1.13
Chmp6P0C0A3 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC8□□□□□ -1.13
Chmp6P0C0A3 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Chmp6P0C0A3 Gm37080-201ENSMUST00000194804 2404 ntBASIC8□□□□□ -1.13
Chmp6P0C0A3 Gm37077-201ENSMUST00000195723 3691 ntBASIC8□□□□□ -1.13
Chmp6P0C0A3 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Chmp6P0C0A3 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC8□□□□□ -1.13
Chmp6P0C0A3 BC085271-201ENSMUST00000191852 1487 ntBASIC8□□□□□ -1.13
Chmp6P0C0A3 Gm6011-201ENSMUST00000211736 1796 ntBASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 n-R5s9-201ENSMUST00000104432 117 ntBASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Gm28006-201ENSMUST00000183841 122 ntBASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Gm28142-201ENSMUST00000186899 698 ntBASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Gm2287-201ENSMUST00000197417 1084 ntBASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC7.99□□□□□ -1.13
Chmp6P0C0A3 CT010472.1-201ENSMUST00000224000 704 ntBASIC7.99□□□□□ -1.13
Chmp6P0C0A3 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC7.99□□□□□ -1.13
Chmp6P0C0A3 AC131710.2-201ENSMUST00000226773 683 ntBASIC7.99□□□□□ -1.13
Chmp6P0C0A3 AC165155.1-201ENSMUST00000228932 445 ntBASIC7.99□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms