Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Clp1Q99LI9 1700024J04Rik-201ENSMUST00000093146 1821 ntBASIC8.49□□□□□ -1.05
Clp1Q99LI9 Olfr1312-202ENSMUST00000213582 2891 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Pi4kb-203ENSMUST00000125476 3400 ntTSL 5 BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Hnrnph2-204ENSMUST00000113202 3988 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Gm26645-201ENSMUST00000181076 1316 ntBASIC8.49□□□□□ -1.05
Clp1Q99LI9 Cd36-206ENSMUST00000197890 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Trp63-201ENSMUST00000040231 4703 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Gm26703-202ENSMUST00000181506 2982 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Zmym5-203ENSMUST00000173954 5357 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Igsf9b-204ENSMUST00000214357 16144 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm10556-201ENSMUST00000180904 3906 ntTSL 2 BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Ttc28-201ENSMUST00000040111 10780 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Clp1Q99LI9 AC154227.2-201ENSMUST00000228677 2101 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Slc6a16-203ENSMUST00000213347 2865 ntAPPRIS P5 TSL 5 BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm38024-201ENSMUST00000192338 2532 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Sept2-213ENSMUST00000168776 3267 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gsdmc2-203ENSMUST00000188691 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm13106-201ENSMUST00000119045 1443 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm5535-208ENSMUST00000210482 1403 ntTSL 5 BASIC8.48□□□□□ -1.05
Clp1Q99LI9 AC124581.3-201ENSMUST00000224270 1624 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 AC156273.1-201ENSMUST00000214570 2762 ntTSL 5 BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Zfp40-201ENSMUST00000037057 4103 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Prickle2-203ENSMUST00000113446 7860 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Clp1Q99LI9 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Hist2h2be-201ENSMUST00000090781 2620 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm13110-201ENSMUST00000138077 3414 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Bbs9-211ENSMUST00000150395 3425 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Cse1l-201ENSMUST00000002790 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm25313-201ENSMUST00000101817 116 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm11905-201ENSMUST00000117653 678 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm6491-201ENSMUST00000118273 990 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm15828-201ENSMUST00000119911 522 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm14989-201ENSMUST00000120497 207 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm12313-201ENSMUST00000121347 421 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm24773-201ENSMUST00000158513 99 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm23387-201ENSMUST00000158586 107 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm25713-201ENSMUST00000158625 109 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm18358-201ENSMUST00000173179 1277 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm23287-201ENSMUST00000179427 116 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm23143-201ENSMUST00000180137 116 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Mir669a-7-201ENSMUST00000180364 87 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC8.48□□□□□ -1.05
Clp1Q99LI9 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Clp1Q99LI9 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm38166-201ENSMUST00000191660 471 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm37463-201ENSMUST00000193819 796 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm6321-201ENSMUST00000194460 1090 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm38360-201ENSMUST00000195130 454 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Mir669a-6-201ENSMUST00000196127 87 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Mir669a-12-201ENSMUST00000197274 87 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Mir669a-5-201ENSMUST00000197439 87 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Mir669a-10-201ENSMUST00000197745 87 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Mir669a-11-201ENSMUST00000197952 87 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Mir669a-4-201ENSMUST00000198665 87 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Mir669a-9-201ENSMUST00000200087 87 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm19211-201ENSMUST00000200251 1206 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Mir669a-8-201ENSMUST00000200268 87 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC8.48□□□□□ -1.05
Clp1Q99LI9 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm46103-201ENSMUST00000217614 341 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 AC163667.2-201ENSMUST00000223769 791 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Fcgr4-201ENSMUST00000078825 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm25739-201ENSMUST00000082886 107 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm24871-201ENSMUST00000083099 116 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Rnu5g-201ENSMUST00000093721 116 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm11855-201ENSMUST00000121562 1869 ntBASIC8.48□□□□□ -1.05
Clp1Q99LI9 Gm11690-201ENSMUST00000128183 1856 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Clp1Q99LI9 Foxp3-203ENSMUST00000115739 3739 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms