Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm28667-201ENSMUST00000189873 2171 ntBASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 AC129308.1-201ENSMUST00000223800 2309 ntBASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Zfx-202ENSMUST00000113925 879 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Gm22795-201ENSMUST00000157233 118 ntBASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Gm26351-201ENSMUST00000157532 232 ntBASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Gm8164-201ENSMUST00000169120 1192 ntBASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Gm26619-201ENSMUST00000180396 1073 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC5.9□□□□□ -1.46
Nup35Q8R4R6 6530403H02Rik-201ENSMUST00000182099 402 ntTSL 3 BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Gm4891-201ENSMUST00000182279 912 ntBASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Gm7734-201ENSMUST00000182832 1011 ntBASIC5.9□□□□□ -1.46
Nup35Q8R4R6 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Gm14214-201ENSMUST00000184654 678 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 2810429I04Rik-204ENSMUST00000185835 923 ntTSL 3 BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 1700025H01Rik-201ENSMUST00000187479 547 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Gm36935-201ENSMUST00000192526 292 ntBASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC5.9□□□□□ -1.46
Nup35Q8R4R6 4930557K07Rik-201ENSMUST00000205110 363 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Gm9689-201ENSMUST00000210009 428 ntBASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Gm33096-201ENSMUST00000210189 493 ntBASIC5.9□□□□□ -1.46
Nup35Q8R4R6 AC133948.1-201ENSMUST00000214867 599 ntTSL 3 BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 AC160931.1-201ENSMUST00000223298 413 ntTSL 3 BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 A1cf-203ENSMUST00000224400 1204 ntBASIC5.9□□□□□ -1.46
Nup35Q8R4R6 AC123867.1-201ENSMUST00000224990 816 ntBASIC5.9□□□□□ -1.46
Nup35Q8R4R6 AC129537.1-202ENSMUST00000226619 430 ntBASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Nup35Q8R4R6 Gm15930-201ENSMUST00000156603 2037 ntBASIC5.9□□□□□ -1.47
Nup35Q8R4R6 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC5.9□□□□□ -1.47
Nup35Q8R4R6 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC5.9□□□□□ -1.47
Nup35Q8R4R6 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Nup35Q8R4R6 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Nup35Q8R4R6 Gm3555-201ENSMUST00000160287 1395 ntBASIC5.9□□□□□ -1.47
Nup35Q8R4R6 AC153729.1-201ENSMUST00000214055 2562 ntBASIC5.9□□□□□ -1.47
Nup35Q8R4R6 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Nup35Q8R4R6 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Nup35Q8R4R6 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Nup35Q8R4R6 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Nup35Q8R4R6 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
Nup35Q8R4R6 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Nup35Q8R4R6 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Nup35Q8R4R6 Gm19801-201ENSMUST00000218231 1882 ntBASIC5.9□□□□□ -1.47
Nup35Q8R4R6 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC5.9□□□□□ -1.47
Nup35Q8R4R6 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Cmah-208ENSMUST00000224819 9482 ntBASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Gm43168-201ENSMUST00000201039 1612 ntBASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Nup35Q8R4R6 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Gm11969-201ENSMUST00000118848 356 ntBASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Gm13915-201ENSMUST00000119314 931 ntBASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Lypd8-201ENSMUST00000013787 1093 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Nup35Q8R4R6 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Gm25947-201ENSMUST00000180343 110 ntBASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Gm8870-201ENSMUST00000188170 775 ntBASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Gm29126-201ENSMUST00000188686 151 ntBASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Gm38078-201ENSMUST00000192771 392 ntBASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Gm18562-201ENSMUST00000209949 915 ntBASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Gm45800-201ENSMUST00000210331 700 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Gm45739-201ENSMUST00000213094 388 ntBASIC5.89□□□□□ -1.47
Nup35Q8R4R6 2900045O20Rik-201ENSMUST00000218374 1292 ntTSL 2 BASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Gm5080-201ENSMUST00000220341 743 ntBASIC5.89□□□□□ -1.47
Nup35Q8R4R6 AC154382.1-201ENSMUST00000220958 1282 ntBASIC5.89□□□□□ -1.47
Nup35Q8R4R6 AL645704.1-201ENSMUST00000221642 604 ntBASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Olfr419-201ENSMUST00000061990 1088 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Gm22053-201ENSMUST00000083394 200 ntBASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
Nup35Q8R4R6 Gm44797-201ENSMUST00000208780 1837 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms