Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm37669-201ENSMUST00000192184 820 ntBASIC9.91□□□□□ -0.82
Nphp4P59240 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC9.91□□□□□ -0.82
Nphp4P59240 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC9.91□□□□□ -0.82
Nphp4P59240 AC153847.1-201ENSMUST00000214524 353 ntBASIC9.91□□□□□ -0.82
Nphp4P59240 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Nphp4P59240 Hecw2-201ENSMUST00000087659 11171 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Nphp4P59240 Zfp871-202ENSMUST00000159086 5111 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nphp4P59240 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nphp4P59240 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nphp4P59240 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nphp4P59240 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC9.91□□□□□ -0.82
Nphp4P59240 CR974429.2-201ENSMUST00000221883 1696 ntBASIC9.91□□□□□ -0.82
Nphp4P59240 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Nphp4P59240 Arhgap19-202ENSMUST00000163265 5058 ntTSL 5 BASIC9.91□□□□□ -0.82
Nphp4P59240 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Nphp4P59240 2900026A02Rik-202ENSMUST00000211733 10238 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Nphp4P59240 Gm18451-201ENSMUST00000196759 1719 ntBASIC9.91□□□□□ -0.82
Nphp4P59240 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Nphp4P59240 Myo7a-202ENSMUST00000107122 6867 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Nphp4P59240 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Nphp4P59240 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
Nphp4P59240 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC9.91□□□□□ -0.82
Nphp4P59240 Gatad2b-205ENSMUST00000199754 7438 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Nphp4P59240 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Nphp4P59240 Gm13196-201ENSMUST00000118297 379 ntBASIC9.9□□□□□ -0.82
Nphp4P59240 Gm14380-201ENSMUST00000122298 431 ntBASIC9.9□□□□□ -0.82
Nphp4P59240 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nphp4P59240 Mir1929-201ENSMUST00000158635 93 ntBASIC9.9□□□□□ -0.82
Nphp4P59240 Gm24228-201ENSMUST00000158829 129 ntBASIC9.9□□□□□ -0.82
Nphp4P59240 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nphp4P59240 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nphp4P59240 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nphp4P59240 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nphp4P59240 Gm2860-201ENSMUST00000199226 707 ntBASIC9.9□□□□□ -0.82
Nphp4P59240 Gm44856-201ENSMUST00000206639 304 ntBASIC9.9□□□□□ -0.82
Nphp4P59240 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nphp4P59240 Gm10126-201ENSMUST00000221732 168 ntBASIC9.9□□□□□ -0.82
Nphp4P59240 AC154324.1-201ENSMUST00000226711 814 ntBASIC9.9□□□□□ -0.82
Nphp4P59240 Gm2840-201ENSMUST00000048361 411 ntBASIC9.9□□□□□ -0.82
Nphp4P59240 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nphp4P59240 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nphp4P59240 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Nphp4P59240 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Nphp4P59240 Fam198b-201ENSMUST00000029567 6627 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nphp4P59240 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Nphp4P59240 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nphp4P59240 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Nphp4P59240 Gm37080-201ENSMUST00000194804 2404 ntBASIC9.9□□□□□ -0.82
Nphp4P59240 Pik3cg-202ENSMUST00000085469 4584 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nphp4P59240 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Nphp4P59240 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nphp4P59240 Gm26575-201ENSMUST00000181714 2232 ntBASIC9.9□□□□□ -0.82
Nphp4P59240 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC9.9□□□□□ -0.82
Nphp4P59240 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nphp4P59240 9530053A07Rik-204ENSMUST00000150948 7895 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Nphp4P59240 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nphp4P59240 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nphp4P59240 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nphp4P59240 Gm44950-201ENSMUST00000206403 2296 ntBASIC9.9□□□□□ -0.82
Nphp4P59240 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Nphp4P59240 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC9.9□□□□□ -0.83
Nphp4P59240 Ctnnd1-212ENSMUST00000111686 6061 ntTSL 5 BASIC9.9□□□□□ -0.83
Nphp4P59240 Gm8812-201ENSMUST00000118496 412 ntBASIC9.9□□□□□ -0.83
Nphp4P59240 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC9.9□□□□□ -0.83
Nphp4P59240 Gm4373-201ENSMUST00000178571 556 ntBASIC9.9□□□□□ -0.83
Nphp4P59240 Gm7426-201ENSMUST00000179046 404 ntBASIC9.9□□□□□ -0.83
Nphp4P59240 Gm8245-201ENSMUST00000182434 987 ntBASIC9.9□□□□□ -0.83
Nphp4P59240 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC9.9□□□□□ -0.83
Nphp4P59240 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Nphp4P59240 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Nphp4P59240 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC9.9□□□□□ -0.83
Nphp4P59240 Gm34424-201ENSMUST00000213400 782 ntBASIC9.9□□□□□ -0.83
Nphp4P59240 CT009527.2-201ENSMUST00000225386 606 ntBASIC9.9□□□□□ -0.83
Nphp4P59240 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Nphp4P59240 Gm9985-201ENSMUST00000044101 510 ntBASIC9.9□□□□□ -0.83
Nphp4P59240 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC9.9□□□□□ -0.83
Nphp4P59240 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC9.9□□□□□ -0.83
Nphp4P59240 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Nphp4P59240 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC9.9□□□□□ -0.83
Nphp4P59240 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC9.9□□□□□ -0.83
Nphp4P59240 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nphp4P59240 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Nphp4P59240 Mroh2a-202ENSMUST00000113130 7491 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
Nphp4P59240 Gm10568-201ENSMUST00000193244 1634 ntBASIC9.89□□□□□ -0.83
Nphp4P59240 Abhd2-201ENSMUST00000037315 6877 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nphp4P59240 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC9.89□□□□□ -0.83
Nphp4P59240 Rdh16-201ENSMUST00000071646 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nphp4P59240 AC154828.1-201ENSMUST00000220696 2810 ntBASIC9.89□□□□□ -0.83
Nphp4P59240 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Nphp4P59240 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nphp4P59240 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Nphp4P59240 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nphp4P59240 Gm13156-201ENSMUST00000118348 321 ntBASIC9.89□□□□□ -0.83
Nphp4P59240 Gm25178-201ENSMUST00000122633 325 ntBASIC9.89□□□□□ -0.83
Nphp4P59240 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC9.89□□□□□ -0.83
Nphp4P59240 Gm2221-201ENSMUST00000209342 418 ntBASIC9.89□□□□□ -0.83
Nphp4P59240 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Nphp4P59240 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Nphp4P59240 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC9.89□□□□□ -0.83
Nphp4P59240 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms