Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm28106-201ENSMUST00000187640 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm28698-201ENSMUST00000187734 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm29224-201ENSMUST00000187965 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm29189-201ENSMUST00000188018 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm29476-201ENSMUST00000188397 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm29505-201ENSMUST00000188424 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm28125-201ENSMUST00000188470 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm29391-201ENSMUST00000188545 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm29280-201ENSMUST00000188571 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm28349-201ENSMUST00000188590 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm29652-201ENSMUST00000188622 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm28819-206ENSMUST00000188816 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm29079-201ENSMUST00000188875 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
NcanP55066 Gm28213-201ENSMUST00000189183 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm29382-201ENSMUST00000189549 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm29377-205ENSMUST00000189603 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm28327-201ENSMUST00000189638 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm28790-201ENSMUST00000189642 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm28907-201ENSMUST00000189700 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm29586-207ENSMUST00000189745 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm29115-201ENSMUST00000189870 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm28366-201ENSMUST00000190147 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm29212-201ENSMUST00000190384 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm29533-201ENSMUST00000190403 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm28162-201ENSMUST00000190545 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm29030-201ENSMUST00000190848 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm28742-201ENSMUST00000191001 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm28899-201ENSMUST00000191161 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm29567-201ENSMUST00000191188 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm28222-201ENSMUST00000191210 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm28776-201ENSMUST00000191282 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm29306-201ENSMUST00000191366 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm29618-201ENSMUST00000191423 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm28136-210ENSMUST00000191432 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm29251-201ENSMUST00000191480 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm28658-201ENSMUST00000191532 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm32180-201ENSMUST00000192415 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm38068-201ENSMUST00000192546 540 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm30598-201ENSMUST00000192620 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm8101-201ENSMUST00000192796 478 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm37627-201ENSMUST00000194585 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm34274-201ENSMUST00000195825 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC7.92□□□□□ -1.14
NcanP55066 Gm2602-201ENSMUST00000202112 571 ntBASIC7.92□□□□□ -1.14
NcanP55066 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC7.92□□□□□ -1.14
NcanP55066 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
NcanP55066 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC7.92□□□□□ -1.14
NcanP55066 AC124184.1-201ENSMUST00000218167 283 ntBASIC7.92□□□□□ -1.14
NcanP55066 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC7.92□□□□□ -1.14
NcanP55066 AL669819.1-201ENSMUST00000225143 330 ntBASIC7.92□□□□□ -1.14
NcanP55066 AC172989.1-201ENSMUST00000226387 513 ntBASIC7.92□□□□□ -1.14
NcanP55066 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
NcanP55066 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
NcanP55066 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
NcanP55066 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
NcanP55066 Fbxo11-201ENSMUST00000005504 4019 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
NcanP55066 Deptor-202ENSMUST00000096433 8547 ntAPPRIS P4 TSL 1 (best) BASIC7.92□□□□□ -1.14
NcanP55066 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
NcanP55066 Syn3-201ENSMUST00000120638 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
NcanP55066 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC7.92□□□□□ -1.14
NcanP55066 BC085271-201ENSMUST00000191852 1487 ntBASIC7.92□□□□□ -1.14
NcanP55066 Dcp1a-201ENSMUST00000022535 5576 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
NcanP55066 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
NcanP55066 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
NcanP55066 Ston1-207ENSMUST00000163588 2983 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
NcanP55066 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
NcanP55066 Pcdhb11-201ENSMUST00000053073 4419 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
NcanP55066 Lyrm1-205ENSMUST00000207270 5845 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NcanP55066 Gm3455-201ENSMUST00000204812 1954 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NcanP55066 Gm26945-201ENSMUST00000183191 2011 ntBASIC7.91□□□□□ -1.14
NcanP55066 Eif2ak4-204ENSMUST00000110870 5116 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NcanP55066 B3galt5-202ENSMUST00000113800 5282 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NcanP55066 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NcanP55066 Olfr943-204ENSMUST00000213830 8305 ntAPPRIS ALT2 TSL 3 BASIC7.91□□□□□ -1.14
NcanP55066 Prkd3-202ENSMUST00000118768 2847 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NcanP55066 Ceacam20-201ENSMUST00000094753 2888 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NcanP55066 Oasl2-201ENSMUST00000031542 3123 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NcanP55066 Il1rap-203ENSMUST00000166294 3200 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NcanP55066 Cdh23-202ENSMUST00000105461 11096 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
NcanP55066 Gm13352-201ENSMUST00000117515 262 ntBASIC7.91□□□□□ -1.14
NcanP55066 Gm15081-201ENSMUST00000119794 844 ntBASIC7.91□□□□□ -1.14
NcanP55066 Gm5166-201ENSMUST00000121332 573 ntBASIC7.91□□□□□ -1.14
NcanP55066 Gm11434-201ENSMUST00000122379 629 ntBASIC7.91□□□□□ -1.14
NcanP55066 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC7.91□□□□□ -1.14
NcanP55066 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC7.91□□□□□ -1.14
NcanP55066 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC7.91□□□□□ -1.14
NcanP55066 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC7.91□□□□□ -1.14
NcanP55066 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC7.91□□□□□ -1.14
NcanP55066 Gm16284-201ENSMUST00000140995 400 ntBASIC7.91□□□□□ -1.14
NcanP55066 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC7.91□□□□□ -1.14
NcanP55066 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC7.91□□□□□ -1.14
NcanP55066 Gm27186-201ENSMUST00000184223 307 ntBASIC7.91□□□□□ -1.14
NcanP55066 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC7.91□□□□□ -1.14
NcanP55066 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC7.91□□□□□ -1.14
NcanP55066 Gm44192-201ENSMUST00000204195 556 ntBASIC7.91□□□□□ -1.14
NcanP55066 Gm31861-201ENSMUST00000204563 672 ntBASIC7.91□□□□□ -1.14
NcanP55066 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC7.91□□□□□ -1.14
NcanP55066 AC112680.2-201ENSMUST00000213119 595 ntBASIC7.91□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms