Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Rai14-201ENSMUST00000090339 4909 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sox1P53783 Nos1-202ENSMUST00000102557 4591 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Sox1P53783 Syt11-201ENSMUST00000090945 4567 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sox1P53783 F730016J06Rik-202ENSMUST00000128888 3699 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Sox1P53783 Gm28177-201ENSMUST00000185516 3532 ntTSL 5 BASIC8.16□□□□□ -1.1
Sox1P53783 Map3k13-201ENSMUST00000042065 6709 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sox1P53783 Lhx6-204ENSMUST00000112966 3188 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Sox1P53783 Pnisr-203ENSMUST00000108229 2922 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Sox1P53783 Slc13a1-201ENSMUST00000031713 2495 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sox1P53783 Nfasc-202ENSMUST00000094569 9739 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sox1P53783 Gm10482-202ENSMUST00000189825 2287 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Sox1P53783 Ttc21b-201ENSMUST00000102718 4470 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sox1P53783 Zfp82-203ENSMUST00000182546 1964 ntAPPRIS ALT2 TSL 3 BASIC8.15□□□□□ -1.1
Sox1P53783 Mpdz-201ENSMUST00000102830 7512 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sox1P53783 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Sox1P53783 Gm5997-201ENSMUST00000208154 1864 ntBASIC8.15□□□□□ -1.1
Sox1P53783 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Sox1P53783 Dhrs7b-202ENSMUST00000108718 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sox1P53783 Prss35-202ENSMUST00000179574 3211 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sox1P53783 Arhgef9-210ENSMUST00000182001 4622 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sox1P53783 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Sox1P53783 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Sox1P53783 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC8.15□□□□□ -1.1
Sox1P53783 C6-204ENSMUST00000162585 2876 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sox1P53783 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Sox1P53783 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sox1P53783 AC123619.1-203ENSMUST00000225276 2757 ntBASIC8.15□□□□□ -1.1
Sox1P53783 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sox1P53783 Cav1-202ENSMUST00000115453 2746 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Sox1P53783 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
Sox1P53783 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Sox1P53783 Brca1-201ENSMUST00000017290 6572 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sox1P53783 D7Ertd443e-203ENSMUST00000172947 2559 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sox1P53783 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Sox1P53783 Gm23701-201ENSMUST00000103893 110 ntBASIC8.15□□□□□ -1.1
Sox1P53783 Gm25093-201ENSMUST00000103993 132 ntBASIC8.15□□□□□ -1.1
Sox1P53783 Gm23706-201ENSMUST00000104369 82 ntBASIC8.15□□□□□ -1.1
Sox1P53783 Gm6743-201ENSMUST00000117345 1066 ntBASIC8.15□□□□□ -1.1
Sox1P53783 Gm12098-201ENSMUST00000118277 508 ntBASIC8.15□□□□□ -1.1
Sox1P53783 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Sox1P53783 Gm16359-201ENSMUST00000124511 289 ntBASIC8.15□□□□□ -1.1
Sox1P53783 8430436N08Rik-201ENSMUST00000129988 1077 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Sox1P53783 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC8.15□□□□□ -1.1
Sox1P53783 Gm16357-201ENSMUST00000144091 474 ntBASIC8.15□□□□□ -1.1
Sox1P53783 Gm26169-201ENSMUST00000158420 135 ntBASIC8.15□□□□□ -1.1
Sox1P53783 Gm22533-201ENSMUST00000158821 274 ntBASIC8.15□□□□□ -1.1
Sox1P53783 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Sox1P53783 Gm18358-201ENSMUST00000173179 1277 ntBASIC8.15□□□□□ -1.1
Sox1P53783 Pea15b-201ENSMUST00000182806 387 ntBASIC8.15□□□□□ -1.1
Sox1P53783 Gm27715-201ENSMUST00000184714 260 ntBASIC8.15□□□□□ -1.1
Sox1P53783 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Sox1P53783 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Sox1P53783 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC8.15□□□□□ -1.1
Sox1P53783 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC8.15□□□□□ -1.1
Sox1P53783 Gm37376-201ENSMUST00000192176 453 ntBASIC8.15□□□□□ -1.1
Sox1P53783 Gm6321-201ENSMUST00000194460 1090 ntBASIC8.15□□□□□ -1.1
Sox1P53783 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC8.15□□□□□ -1.1
Sox1P53783 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC8.15□□□□□ -1.1
Sox1P53783 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sox1P53783 Gm43036-201ENSMUST00000200594 373 ntBASIC8.15□□□□□ -1.1
Sox1P53783 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Sox1P53783 Gm10043-201ENSMUST00000210691 235 ntBASIC8.15□□□□□ -1.1
Sox1P53783 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC8.15□□□□□ -1.1
Sox1P53783 AC151971.2-201ENSMUST00000217540 909 ntBASIC8.15□□□□□ -1.1
Sox1P53783 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC8.15□□□□□ -1.1
Sox1P53783 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC8.15□□□□□ -1.1
Sox1P53783 AC114008.1-201ENSMUST00000226193 937 ntBASIC8.15□□□□□ -1.1
Sox1P53783 Diaph3-206ENSMUST00000226745 713 ntBASIC8.15□□□□□ -1.1
Sox1P53783 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Sox1P53783 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sox1P53783 Gm24613-201ENSMUST00000083266 130 ntBASIC8.15□□□□□ -1.1
Sox1P53783 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC8.15□□□□□ -1.1
Sox1P53783 Gm10155-201ENSMUST00000084598 483 ntBASIC8.15□□□□□ -1.1
Sox1P53783 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Sox1P53783 Slc15a5-206ENSMUST00000171804 2461 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Sox1P53783 Olfr1219-203ENSMUST00000214442 3694 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Sox1P53783 Adtrp-201ENSMUST00000072012 2440 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sox1P53783 Sfi1-210ENSMUST00000140846 3604 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Sox1P53783 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Sox1P53783 Osgepl1-202ENSMUST00000114484 2283 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sox1P53783 Rnf214-209ENSMUST00000161203 3294 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Sox1P53783 Sorbs1-211ENSMUST00000224667 4313 ntAPPRIS ALT2 BASIC8.15□□□□□ -1.11
Sox1P53783 Parp9-201ENSMUST00000023622 2973 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Sox1P53783 AA986860-201ENSMUST00000039323 2909 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Sox1P53783 Zfp563-201ENSMUST00000131722 1938 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
Sox1P53783 Gm29761-201ENSMUST00000215964 1939 ntBASIC8.15□□□□□ -1.11
Sox1P53783 Gm38001-201ENSMUST00000192900 3761 ntBASIC8.15□□□□□ -1.11
Sox1P53783 Gm37675-201ENSMUST00000192303 2847 ntBASIC8.15□□□□□ -1.11
Sox1P53783 Prickle2-202ENSMUST00000113445 3708 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Sox1P53783 AC142266.1-202ENSMUST00000227784 3733 ntBASIC8.15□□□□□ -1.11
Sox1P53783 Hnrnpk-224ENSMUST00000224182 2754 ntBASIC8.15□□□□□ -1.11
Sox1P53783 D830005E20Rik-201ENSMUST00000217716 1844 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Sox1P53783 Gm42595-201ENSMUST00000196771 1607 ntBASIC8.14□□□□□ -1.11
Sox1P53783 Gm33994-201ENSMUST00000193724 2414 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Sox1P53783 Ldb2-201ENSMUST00000070748 2418 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sox1P53783 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sox1P53783 Sp100-210ENSMUST00000147552 1597 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Sox1P53783 Olfr531-202ENSMUST00000216053 2330 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Sox1P53783 CT025619.2-201ENSMUST00000216975 2312 ntBASIC8.14□□□□□ -1.11
Sox1P53783 Smpd4-201ENSMUST00000006053 4623 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms