Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Spag9-205ENSMUST00000103168 6840 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cux1P53564 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cux1P53564 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cux1P53564 Nckap1l-201ENSMUST00000047405 4717 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cux1P53564 Dgkh-204ENSMUST00000227767 3319 ntBASIC11.23□□□□□ -0.61
Cux1P53564 Baz2a-203ENSMUST00000217851 8385 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cux1P53564 Gm26575-201ENSMUST00000181714 2232 ntBASIC11.23□□□□□ -0.61
Cux1P53564 Add2-209ENSMUST00000204059 8182 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cux1P53564 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cux1P53564 Ctnnd1-209ENSMUST00000111678 5870 ntTSL 5 BASIC11.23□□□□□ -0.61
Cux1P53564 Ank3-231ENSMUST00000182884 9963 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cux1P53564 Cacna1c-222ENSMUST00000190285 6585 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cux1P53564 Gm12439-201ENSMUST00000117162 365 ntBASIC11.23□□□□□ -0.61
Cux1P53564 Gm12653-201ENSMUST00000117778 561 ntBASIC11.23□□□□□ -0.61
Cux1P53564 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Cux1P53564 Gm11553-201ENSMUST00000120682 240 ntBASIC11.23□□□□□ -0.61
Cux1P53564 Gm16016-201ENSMUST00000120831 550 ntBASIC11.23□□□□□ -0.61
Cux1P53564 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cux1P53564 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC11.23□□□□□ -0.61
Cux1P53564 Gm25969-201ENSMUST00000157166 132 ntBASIC11.23□□□□□ -0.61
Cux1P53564 Gm24228-201ENSMUST00000158829 129 ntBASIC11.23□□□□□ -0.61
Cux1P53564 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cux1P53564 Gm38022-201ENSMUST00000191762 403 ntBASIC11.23□□□□□ -0.61
Cux1P53564 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC11.23□□□□□ -0.61
Cux1P53564 Gm43048-201ENSMUST00000196101 388 ntBASIC11.23□□□□□ -0.61
Cux1P53564 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Cux1P53564 Gm19088-201ENSMUST00000198800 566 ntBASIC11.23□□□□□ -0.61
Cux1P53564 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC11.23□□□□□ -0.61
Cux1P53564 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC11.23□□□□□ -0.61
Cux1P53564 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC11.23□□□□□ -0.61
Cux1P53564 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cux1P53564 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cux1P53564 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cux1P53564 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cux1P53564 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cux1P53564 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Cux1P53564 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Cux1P53564 Gm43800-201ENSMUST00000201868 2731 ntBASIC11.23□□□□□ -0.61
Cux1P53564 Inpp5d-210ENSMUST00000169754 4937 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cux1P53564 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cux1P53564 Fam214a-201ENSMUST00000081746 3795 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cux1P53564 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cux1P53564 Rnmt-201ENSMUST00000009679 5008 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cux1P53564 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cux1P53564 Clasp1-220ENSMUST00000191445 4914 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cux1P53564 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC11.22□□□□□ -0.61
Cux1P53564 Gm44437-201ENSMUST00000203832 4038 ntBASIC11.22□□□□□ -0.61
Cux1P53564 Ttc37-201ENSMUST00000091466 5381 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cux1P53564 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cux1P53564 Rai14-201ENSMUST00000090339 4909 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cux1P53564 Gm9144-201ENSMUST00000101625 1008 ntBASIC11.22□□□□□ -0.61
Cux1P53564 Gm13141-201ENSMUST00000117417 456 ntBASIC11.22□□□□□ -0.61
Cux1P53564 Gm13878-201ENSMUST00000117986 577 ntBASIC11.22□□□□□ -0.61
Cux1P53564 Gm12740-201ENSMUST00000118794 308 ntBASIC11.22□□□□□ -0.61
Cux1P53564 Gm6654-201ENSMUST00000118950 348 ntBASIC11.22□□□□□ -0.61
Cux1P53564 Gm11445-201ENSMUST00000119101 532 ntBASIC11.22□□□□□ -0.61
Cux1P53564 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC11.22□□□□□ -0.61
Cux1P53564 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cux1P53564 Gm4373-201ENSMUST00000178571 556 ntBASIC11.22□□□□□ -0.61
Cux1P53564 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cux1P53564 6720483E21Rik-201ENSMUST00000181654 1120 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cux1P53564 Gm26528-201ENSMUST00000181965 283 ntBASIC11.22□□□□□ -0.61
Cux1P53564 Gm28952-201ENSMUST00000189285 681 ntBASIC11.22□□□□□ -0.61
Cux1P53564 Gm7804-202ENSMUST00000194187 854 ntBASIC11.22□□□□□ -0.61
Cux1P53564 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC11.22□□□□□ -0.61
Cux1P53564 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC11.22□□□□□ -0.61
Cux1P53564 AC167013.4-201ENSMUST00000226712 317 ntBASIC11.22□□□□□ -0.61
Cux1P53564 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cux1P53564 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cux1P53564 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cux1P53564 Rreb1-201ENSMUST00000037232 8395 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cux1P53564 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cux1P53564 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cux1P53564 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cux1P53564 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cux1P53564 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC11.22□□□□□ -0.61
Cux1P53564 Gm5361-201ENSMUST00000211041 1498 ntBASIC11.22□□□□□ -0.61
Cux1P53564 Uba1-202ENSMUST00000089217 4044 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cux1P53564 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cux1P53564 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cux1P53564 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cux1P53564 Ank3-210ENSMUST00000182155 6375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cux1P53564 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cux1P53564 Adgrb3-207ENSMUST00000151309 5448 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cux1P53564 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cux1P53564 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cux1P53564 Cdc40-201ENSMUST00000044166 3534 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cux1P53564 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cux1P53564 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Cux1P53564 Gm13732-201ENSMUST00000117753 535 ntBASIC11.21□□□□□ -0.61
Cux1P53564 Gm15310-201ENSMUST00000117891 372 ntBASIC11.21□□□□□ -0.61
Cux1P53564 Gm11434-201ENSMUST00000122379 629 ntBASIC11.21□□□□□ -0.61
Cux1P53564 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC11.21□□□□□ -0.61
Cux1P53564 Gm26729-201ENSMUST00000180744 352 ntBASIC11.21□□□□□ -0.61
Cux1P53564 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC11.21□□□□□ -0.61
Cux1P53564 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC11.21□□□□□ -0.61
Cux1P53564 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC11.21□□□□□ -0.61
Cux1P53564 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Cux1P53564 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cux1P53564 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms