Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Usp4P35123 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC7.95□□□□□ -1.14
Usp4P35123 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp4P35123 Gm44101-201ENSMUST00000203951 2221 ntBASIC7.95□□□□□ -1.14
Usp4P35123 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Usp4P35123 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC7.95□□□□□ -1.14
Usp4P35123 Gm7842-201ENSMUST00000217691 1379 ntBASIC7.95□□□□□ -1.14
Usp4P35123 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC7.95□□□□□ -1.14
Usp4P35123 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC7.95□□□□□ -1.14
Usp4P35123 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp4P35123 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp4P35123 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp4P35123 D3Ertd751e-207ENSMUST00000146165 3574 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp4P35123 Cxcl5-201ENSMUST00000031318 1575 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
Usp4P35123 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp4P35123 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp4P35123 Gm16233-201ENSMUST00000136170 1623 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Usp4P35123 Gm25167-201ENSMUST00000104188 120 ntBASIC7.94□□□□□ -1.14
Usp4P35123 Gm26143-201ENSMUST00000104480 108 ntBASIC7.94□□□□□ -1.14
Usp4P35123 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC7.94□□□□□ -1.14
Usp4P35123 Gm12604-201ENSMUST00000118382 380 ntBASIC7.94□□□□□ -1.14
Usp4P35123 Gm12687-201ENSMUST00000119752 706 ntBASIC7.94□□□□□ -1.14
Usp4P35123 Gm14528-201ENSMUST00000120615 231 ntBASIC7.94□□□□□ -1.14
Usp4P35123 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC7.94□□□□□ -1.14
Usp4P35123 Gm15586-201ENSMUST00000121218 528 ntBASIC7.94□□□□□ -1.14
Usp4P35123 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Usp4P35123 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC7.94□□□□□ -1.14
Usp4P35123 Gm7707-201ENSMUST00000165950 1156 ntBASIC7.94□□□□□ -1.14
Usp4P35123 Mir3078-201ENSMUST00000175231 87 ntBASIC7.94□□□□□ -1.14
Usp4P35123 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Usp4P35123 Gm10182-201ENSMUST00000178676 273 ntBASIC7.94□□□□□ -1.14
Usp4P35123 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Usp4P35123 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp4P35123 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC7.94□□□□□ -1.14
Usp4P35123 AC137678.1-201ENSMUST00000198370 118 ntBASIC7.94□□□□□ -1.14
Usp4P35123 Gm43222-201ENSMUST00000199013 603 ntBASIC7.94□□□□□ -1.14
Usp4P35123 Gm44245-201ENSMUST00000204304 232 ntBASIC7.94□□□□□ -1.14
Usp4P35123 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC7.94□□□□□ -1.14
Usp4P35123 Mcee-204ENSMUST00000206882 391 ntTSL 2 BASIC7.94□□□□□ -1.14
Usp4P35123 Gm7588-201ENSMUST00000216866 571 ntBASIC7.94□□□□□ -1.14
Usp4P35123 Gm19011-201ENSMUST00000221777 808 ntBASIC7.94□□□□□ -1.14
Usp4P35123 AC130219.2-201ENSMUST00000228765 807 ntBASIC7.94□□□□□ -1.14
Usp4P35123 AC122877.1-201ENSMUST00000228873 218 ntBASIC7.94□□□□□ -1.14
Usp4P35123 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp4P35123 Gm5316-201ENSMUST00000050391 270 ntBASIC7.94□□□□□ -1.14
Usp4P35123 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
Usp4P35123 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Usp4P35123 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp4P35123 Olfr120-201ENSMUST00000077498 993 ntBASIC7.94□□□□□ -1.14
Usp4P35123 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp4P35123 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Usp4P35123 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
Usp4P35123 Gm16072-201ENSMUST00000119574 2377 ntBASIC7.94□□□□□ -1.14
Usp4P35123 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Usp4P35123 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Usp4P35123 Gm42837-201ENSMUST00000197071 2829 ntBASIC7.94□□□□□ -1.14
Usp4P35123 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Usp4P35123 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp4P35123 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Usp4P35123 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp4P35123 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC7.94□□□□□ -1.14
Usp4P35123 Ssr3-201ENSMUST00000029414 2957 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp4P35123 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp4P35123 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Usp4P35123 Gc-201ENSMUST00000049209 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp4P35123 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp4P35123 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Usp4P35123 Lockd-201ENSMUST00000183867 5662 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Usp4P35123 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp4P35123 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
Usp4P35123 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Usp4P35123 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Usp4P35123 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Usp4P35123 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Usp4P35123 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Usp4P35123 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Usp4P35123 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Usp4P35123 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Usp4P35123 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Usp4P35123 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Usp4P35123 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Usp4P35123 Gm43429-201ENSMUST00000197889 2251 ntBASIC7.93□□□□□ -1.14
Usp4P35123 Gm22934-201ENSMUST00000103961 132 ntBASIC7.93□□□□□ -1.14
Usp4P35123 Gm26014-201ENSMUST00000104405 132 ntBASIC7.93□□□□□ -1.14
Usp4P35123 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC7.93□□□□□ -1.14
Usp4P35123 Gm12838-201ENSMUST00000116278 325 ntBASIC7.93□□□□□ -1.14
Usp4P35123 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC7.93□□□□□ -1.14
Usp4P35123 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC7.93□□□□□ -1.14
Usp4P35123 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Usp4P35123 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC7.93□□□□□ -1.14
Usp4P35123 Gm20430-201ENSMUST00000172474 207 ntBASIC7.93□□□□□ -1.14
Usp4P35123 Gm5698-201ENSMUST00000178317 724 ntBASIC7.93□□□□□ -1.14
Usp4P35123 Mir6999-201ENSMUST00000183498 61 ntBASIC7.93□□□□□ -1.14
Usp4P35123 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC7.93□□□□□ -1.14
Usp4P35123 Gm6197-201ENSMUST00000192273 454 ntBASIC7.93□□□□□ -1.14
Usp4P35123 Gm37901-201ENSMUST00000195107 514 ntBASIC7.93□□□□□ -1.14
Usp4P35123 Gm37481-201ENSMUST00000195176 403 ntBASIC7.93□□□□□ -1.14
Usp4P35123 Mir1897-202ENSMUST00000198006 79 ntBASIC7.93□□□□□ -1.14
Usp4P35123 Gm20223-201ENSMUST00000199932 805 ntBASIC7.93□□□□□ -1.14
Usp4P35123 Gm19211-201ENSMUST00000200251 1206 ntBASIC7.93□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms