Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx1P18111 Vmn2r-ps95-201ENSMUST00000222423 2316 ntBASIC6.04□□□□□ -1.44
Cdx1P18111 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC6.04□□□□□ -1.44
Cdx1P18111 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Cdx1P18111 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx1P18111 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx1P18111 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx1P18111 Gm8428-201ENSMUST00000159919 1784 ntBASIC6.04□□□□□ -1.44
Cdx1P18111 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.04□□□□□ -1.44
Cdx1P18111 Olfr639-201ENSMUST00000106862 1020 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Cdx1P18111 Gm14659-201ENSMUST00000117667 843 ntBASIC6.04□□□□□ -1.44
Cdx1P18111 Gm15715-201ENSMUST00000118032 283 ntBASIC6.04□□□□□ -1.44
Cdx1P18111 Gm14584-201ENSMUST00000118956 637 ntBASIC6.04□□□□□ -1.44
Cdx1P18111 Rhox3g-201ENSMUST00000119965 991 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Cdx1P18111 Gm11901-201ENSMUST00000120412 437 ntBASIC6.04□□□□□ -1.44
Cdx1P18111 Gm11954-201ENSMUST00000121403 349 ntBASIC6.04□□□□□ -1.44
Cdx1P18111 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC6.04□□□□□ -1.44
Cdx1P18111 Kbtbd8os-201ENSMUST00000135145 427 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx1P18111 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC6.04□□□□□ -1.44
Cdx1P18111 Rubie-201ENSMUST00000151828 1137 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx1P18111 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC6.04□□□□□ -1.44
Cdx1P18111 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC6.04□□□□□ -1.44
Cdx1P18111 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Cdx1P18111 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Cdx1P18111 Snhg7-201ENSMUST00000181621 139 ntBASIC6.04□□□□□ -1.44
Cdx1P18111 Gm27617-201ENSMUST00000184321 168 ntBASIC6.04□□□□□ -1.44
Cdx1P18111 Gm8524-201ENSMUST00000186232 379 ntBASIC6.04□□□□□ -1.44
Cdx1P18111 Gm36996-201ENSMUST00000194466 250 ntBASIC6.04□□□□□ -1.44
Cdx1P18111 Gm42525-201ENSMUST00000196257 527 ntBASIC6.04□□□□□ -1.44
Cdx1P18111 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC6.04□□□□□ -1.44
Cdx1P18111 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC6.04□□□□□ -1.44
Cdx1P18111 Gm45255-201ENSMUST00000209943 811 ntBASIC6.04□□□□□ -1.44
Cdx1P18111 Gm9689-201ENSMUST00000210009 428 ntBASIC6.04□□□□□ -1.44
Cdx1P18111 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC6.04□□□□□ -1.44
Cdx1P18111 CT033774.2-201ENSMUST00000222079 256 ntBASIC6.04□□□□□ -1.44
Cdx1P18111 Gm5789-201ENSMUST00000222643 865 ntBASIC6.04□□□□□ -1.44
Cdx1P18111 Ly6f-201ENSMUST00000023247 877 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Cdx1P18111 Mettl21c-201ENSMUST00000061421 1086 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx1P18111 Olfr432-201ENSMUST00000062665 939 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Cdx1P18111 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Cdx1P18111 Zranb1-201ENSMUST00000033265 2210 ntAPPRIS P2 TSL 2 BASIC6.04□□□□□ -1.44
Cdx1P18111 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx1P18111 Gm1976-202ENSMUST00000182639 1853 ntTSL 2 BASIC6.04□□□□□ -1.44
Cdx1P18111 Gm37056-201ENSMUST00000192141 1865 ntBASIC6.04□□□□□ -1.44
Cdx1P18111 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx1P18111 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx1P18111 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.04□□□□□ -1.44
Cdx1P18111 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx1P18111 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx1P18111 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx1P18111 Sept14-201ENSMUST00000042266 1381 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Cdx1P18111 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx1P18111 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC6.03□□□□□ -1.44
Cdx1P18111 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx1P18111 Gm15930-201ENSMUST00000156603 2037 ntBASIC6.03□□□□□ -1.44
Cdx1P18111 Gm6819-201ENSMUST00000185325 1891 ntBASIC6.03□□□□□ -1.44
Cdx1P18111 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Cdx1P18111 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Cdx1P18111 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Cdx1P18111 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Cdx1P18111 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx1P18111 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx1P18111 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx1P18111 Gm25761-201ENSMUST00000103983 128 ntBASIC6.03□□□□□ -1.44
Cdx1P18111 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx1P18111 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.03□□□□□ -1.44
Cdx1P18111 Gm9392-201ENSMUST00000119337 554 ntBASIC6.03□□□□□ -1.44
Cdx1P18111 Gm15842-201ENSMUST00000120513 618 ntBASIC6.03□□□□□ -1.44
Cdx1P18111 Gm12599-201ENSMUST00000120534 792 ntBASIC6.03□□□□□ -1.44
Cdx1P18111 Gm14414-201ENSMUST00000120833 573 ntBASIC6.03□□□□□ -1.44
Cdx1P18111 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC6.03□□□□□ -1.44
Cdx1P18111 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx1P18111 Rpl21-ps8-201ENSMUST00000130005 478 ntBASIC6.03□□□□□ -1.44
Cdx1P18111 Gm1322-201ENSMUST00000134620 704 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx1P18111 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC6.03□□□□□ -1.44
Cdx1P18111 Gm11266-201ENSMUST00000139835 1271 ntTSL 2 BASIC6.03□□□□□ -1.44
Cdx1P18111 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC6.03□□□□□ -1.44
Cdx1P18111 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx1P18111 Gm23222-201ENSMUST00000158117 76 ntBASIC6.03□□□□□ -1.44
Cdx1P18111 Mir1231-201ENSMUST00000175639 81 ntBASIC6.03□□□□□ -1.44
Cdx1P18111 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx1P18111 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC6.03□□□□□ -1.44
Cdx1P18111 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx1P18111 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Cdx1P18111 Scgb2b11-201ENSMUST00000188293 523 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Cdx1P18111 1700029J03Rik-202ENSMUST00000189879 712 ntTSL 5 BASIC6.03□□□□□ -1.44
Cdx1P18111 1700003L19Rik-201ENSMUST00000190074 746 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx1P18111 Gm28530-201ENSMUST00000190473 577 ntBASIC6.03□□□□□ -1.44
Cdx1P18111 Gm37966-201ENSMUST00000193122 326 ntBASIC6.03□□□□□ -1.44
Cdx1P18111 Gm37270-201ENSMUST00000194277 330 ntBASIC6.03□□□□□ -1.44
Cdx1P18111 Gm9497-201ENSMUST00000199908 538 ntBASIC6.03□□□□□ -1.44
Cdx1P18111 Gm43461-201ENSMUST00000202351 996 ntBASIC6.03□□□□□ -1.44
Cdx1P18111 Gm8637-201ENSMUST00000212919 1085 ntBASIC6.03□□□□□ -1.44
Cdx1P18111 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC6.03□□□□□ -1.44
Cdx1P18111 Gpx4-ps2-202ENSMUST00000217344 782 ntBASIC6.03□□□□□ -1.44
Cdx1P18111 Gm18112-201ENSMUST00000219862 1195 ntBASIC6.03□□□□□ -1.44
Cdx1P18111 1700104L18Rik-201ENSMUST00000220132 598 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx1P18111 AC154738.3-201ENSMUST00000227953 409 ntBASIC6.03□□□□□ -1.44
Cdx1P18111 AC131586.4-201ENSMUST00000228424 668 ntBASIC6.03□□□□□ -1.44
Cdx1P18111 Ghrh-201ENSMUST00000029172 516 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms