Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Hnrnpc-205ENSMUST00000227242 2617 ntBASIC6.85□□□□□ -1.31
Hoxd3P09027 Cfap58-201ENSMUST00000066308 3345 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Pnisr-203ENSMUST00000108229 2922 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Pdzd2-201ENSMUST00000075317 10756 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Hoxd3P09027 Gm43154-206ENSMUST00000209562 1884 ntTSL 5 BASIC6.85□□□□□ -1.31
Hoxd3P09027 AC155941.2-201ENSMUST00000218795 1861 ntTSL 5 BASIC6.85□□□□□ -1.31
Hoxd3P09027 Pcm1-201ENSMUST00000045218 6624 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Gm42856-201ENSMUST00000200848 2852 ntBASIC6.85□□□□□ -1.31
Hoxd3P09027 Top3a-202ENSMUST00000102668 3542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Prr14-202ENSMUST00000106292 2175 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Hoxd3P09027 Foxn3-201ENSMUST00000046859 7705 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Patj-205ENSMUST00000107030 2104 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Clcn7-201ENSMUST00000040729 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Gm7882-201ENSMUST00000177915 1762 ntBASIC6.85□□□□□ -1.31
Hoxd3P09027 Pparg-201ENSMUST00000000450 1767 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Gm28653-201ENSMUST00000185494 5276 ntBASIC6.85□□□□□ -1.31
Hoxd3P09027 Aldh1a1-201ENSMUST00000087638 2053 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Acox3-202ENSMUST00000068947 3976 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm26953-205ENSMUST00000212599 1435 ntTSL 5 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Nnt-206ENSMUST00000223268 3339 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Hoxd3P09027 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Cldn34c1-202ENSMUST00000113348 3281 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Hoxd3P09027 Rbm12-201ENSMUST00000059647 6667 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Hoxd3P09027 Dhx32-202ENSMUST00000063669 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Hoxd3P09027 Mpp1-203ENSMUST00000114092 1378 ntTSL 5 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Rims2-201ENSMUST00000042917 4719 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Hoxd3P09027 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm16206-201ENSMUST00000132485 1966 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Hoxd3P09027 Chat-201ENSMUST00000070125 2858 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Hoxd3P09027 Akap1-202ENSMUST00000107903 3721 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Hoxd3P09027 Olfr582-204ENSMUST00000214021 3108 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Hoxd3P09027 C2-205ENSMUST00000148431 1946 ntTSL 5 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Cttnbp2-201ENSMUST00000090601 5183 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Hoxd3P09027 Ccdc116-201ENSMUST00000023452 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm16023-201ENSMUST00000137752 2490 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm8314-201ENSMUST00000208964 1858 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm38056-201ENSMUST00000193928 5027 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Trcg1-201ENSMUST00000093837 2701 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Tiam1-213ENSMUST00000163370 7255 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Hoxd3P09027 Hspa12b-202ENSMUST00000100763 628 ntTSL 2 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Calhm1-201ENSMUST00000111813 1047 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Swi5-202ENSMUST00000113395 712 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Timp1-202ENSMUST00000115342 883 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm12386-201ENSMUST00000117380 688 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm12370-201ENSMUST00000117809 604 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm11913-201ENSMUST00000119094 336 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm12873-201ENSMUST00000119988 422 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm12464-201ENSMUST00000121385 1016 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm15157-201ENSMUST00000121852 702 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Fam229b-204ENSMUST00000134279 700 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Kcnab3os-201ENSMUST00000136196 566 ntTSL 3 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Fam229b-207ENSMUST00000137132 663 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm11342-201ENSMUST00000147704 621 ntTSL 5 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm17154-201ENSMUST00000165748 431 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm17060-201ENSMUST00000172394 824 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm23403-201ENSMUST00000179169 110 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm4076-201ENSMUST00000179230 965 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm25284-201ENSMUST00000180345 141 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm4823-201ENSMUST00000181990 984 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm27599-201ENSMUST00000183758 174 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm29460-201ENSMUST00000188607 714 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm29441-201ENSMUST00000191584 211 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 1700113B19Rik-201ENSMUST00000191817 420 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC6.84□□□□□ -1.31
Hoxd3P09027 4933438B17Rik-201ENSMUST00000196336 1169 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm19185-201ENSMUST00000196365 643 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm2566-201ENSMUST00000201267 431 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Olfr326-ps1-201ENSMUST00000204790 392 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm18058-201ENSMUST00000207385 492 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm7948-201ENSMUST00000212607 844 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Olfr1395-203ENSMUST00000214195 2984 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Hoxd3P09027 AC154028.1-201ENSMUST00000217071 379 ntTSL 5 BASIC6.84□□□□□ -1.31
Hoxd3P09027 AC153821.1-203ENSMUST00000218105 607 ntTSL 3 BASIC6.84□□□□□ -1.31
Hoxd3P09027 4930477N07Rik-201ENSMUST00000218762 614 ntTSL 5 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm30738-201ENSMUST00000221346 502 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC6.84□□□□□ -1.31
Hoxd3P09027 AC125019.1-201ENSMUST00000224809 908 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 AC154795.1-201ENSMUST00000225611 364 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 CT025548.1-201ENSMUST00000227459 257 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Oard1-201ENSMUST00000046651 1135 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Hoxd3P09027 1700028K03Rik-201ENSMUST00000058921 797 ntAPPRIS P3 TSL 2 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Hoxd3P09027 Snora61-201ENSMUST00000083015 130 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm25578-201ENSMUST00000083406 104 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Defb23-201ENSMUST00000099206 624 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 103.2 ms