Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC5.95□□□□□ -1.46
Hmgb3O54879 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC5.95□□□□□ -1.46
Hmgb3O54879 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC5.95□□□□□ -1.46
Hmgb3O54879 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
Hmgb3O54879 CT025618.1-201ENSMUST00000227409 1279 ntBASIC5.95□□□□□ -1.46
Hmgb3O54879 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Hmgb3O54879 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
Hmgb3O54879 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
Hmgb3O54879 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Hmgb3O54879 Gm22865-201ENSMUST00000083949 214 ntBASIC5.95□□□□□ -1.46
Hmgb3O54879 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Hmgb3O54879 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Hmgb3O54879 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Hmgb3O54879 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Hmgb3O54879 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Hmgb3O54879 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Hmgb3O54879 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Hmgb3O54879 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC5.95□□□□□ -1.46
Hmgb3O54879 Gm10845-202ENSMUST00000228217 3389 ntBASIC5.95□□□□□ -1.46
Hmgb3O54879 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Hmgb3O54879 Gm42820-201ENSMUST00000200084 3063 ntBASIC5.95□□□□□ -1.46
Hmgb3O54879 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
Hmgb3O54879 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
Hmgb3O54879 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Hmgb3O54879 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Hmgb3O54879 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Hmgb3O54879 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 AC124675.1-201ENSMUST00000226263 1390 ntBASIC5.94□□□□□ -1.46
Hmgb3O54879 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 AC138765.2-202ENSMUST00000228418 3435 ntBASIC5.94□□□□□ -1.46
Hmgb3O54879 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.94□□□□□ -1.46
Hmgb3O54879 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 n-R5s90-201ENSMUST00000103968 118 ntBASIC5.94□□□□□ -1.46
Hmgb3O54879 Gm16221-201ENSMUST00000117331 393 ntBASIC5.94□□□□□ -1.46
Hmgb3O54879 Gm13552-201ENSMUST00000118837 417 ntBASIC5.94□□□□□ -1.46
Hmgb3O54879 Gm12710-201ENSMUST00000119011 216 ntBASIC5.94□□□□□ -1.46
Hmgb3O54879 Gm5809-201ENSMUST00000121854 529 ntBASIC5.94□□□□□ -1.46
Hmgb3O54879 Gm16267-201ENSMUST00000140569 732 ntTSL 3 BASIC5.94□□□□□ -1.46
Hmgb3O54879 E130215H24Rik-201ENSMUST00000145525 939 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC5.94□□□□□ -1.46
Hmgb3O54879 Gm26048-201ENSMUST00000157305 142 ntBASIC5.94□□□□□ -1.46
Hmgb3O54879 Gm22224-201ENSMUST00000157357 93 ntBASIC5.94□□□□□ -1.46
Hmgb3O54879 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Hmgb3O54879 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 Gm21917-203ENSMUST00000180309 561 ntTSL 3 BASIC5.94□□□□□ -1.46
Hmgb3O54879 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 Mir6999-201ENSMUST00000183498 61 ntBASIC5.94□□□□□ -1.46
Hmgb3O54879 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Hmgb3O54879 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 Gm17867-201ENSMUST00000188981 391 ntBASIC5.94□□□□□ -1.46
Hmgb3O54879 Gm6750-201ENSMUST00000189273 268 ntBASIC5.94□□□□□ -1.46
Hmgb3O54879 Tmem265-202ENSMUST00000190278 587 ntTSL 3 BASIC5.94□□□□□ -1.46
Hmgb3O54879 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Hmgb3O54879 Gm43647-201ENSMUST00000198142 486 ntTSL 5 BASIC5.94□□□□□ -1.46
Hmgb3O54879 Gm31243-202ENSMUST00000198354 628 ntTSL 3 BASIC5.94□□□□□ -1.46
Hmgb3O54879 Gm7285-201ENSMUST00000198801 580 ntBASIC5.94□□□□□ -1.46
Hmgb3O54879 4933417G07Rik-201ENSMUST00000199681 1137 ntBASIC5.94□□□□□ -1.46
Hmgb3O54879 Ceacam1-204ENSMUST00000205308 993 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 Gm45155-201ENSMUST00000207365 596 ntTSL 2 BASIC5.94□□□□□ -1.46
Hmgb3O54879 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC5.94□□□□□ -1.46
Hmgb3O54879 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC5.94□□□□□ -1.46
Hmgb3O54879 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC5.94□□□□□ -1.46
Hmgb3O54879 Gm6989-201ENSMUST00000218409 654 ntBASIC5.94□□□□□ -1.46
Hmgb3O54879 Ryk-ps1-201ENSMUST00000219713 235 ntBASIC5.94□□□□□ -1.46
Hmgb3O54879 Gm35412-201ENSMUST00000220437 999 ntBASIC5.94□□□□□ -1.46
Hmgb3O54879 AC122309.1-201ENSMUST00000226945 421 ntBASIC5.94□□□□□ -1.46
Hmgb3O54879 Plac8-201ENSMUST00000031264 744 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 Gm5292-201ENSMUST00000073317 580 ntBASIC5.94□□□□□ -1.46
Hmgb3O54879 Krtap6-3-201ENSMUST00000079151 444 ntBASIC5.94□□□□□ -1.46
Hmgb3O54879 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 Olfr1283-201ENSMUST00000090328 1026 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Hmgb3O54879 Folr2-201ENSMUST00000094141 1067 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Hmgb3O54879 Olfr1055-201ENSMUST00000099894 1182 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Hmgb3O54879 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Hmgb3O54879 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Hmgb3O54879 Gm38263-201ENSMUST00000195879 3059 ntBASIC5.94□□□□□ -1.46
Hmgb3O54879 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 Zbtb26-202ENSMUST00000102789 2047 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC5.94□□□□□ -1.46
Hmgb3O54879 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hmgb3O54879 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.94□□□□□ -1.46
Hmgb3O54879 Gm18451-201ENSMUST00000196759 1719 ntBASIC5.94□□□□□ -1.46
Hmgb3O54879 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Hmgb3O54879 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms