Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Ift81-201ENSMUST00000031426 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Ttc41-205ENSMUST00000219108 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Fam135b-201ENSMUST00000022953 4623 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Brca1-201ENSMUST00000017290 6572 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Sptan1-201ENSMUST00000046257 7820 ntTSL 5 BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Igkv12-89-201ENSMUST00000103335 335 ntAPPRIS ALT2 BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Gm5834-201ENSMUST00000126680 1026 ntBASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Mir1983-201ENSMUST00000157523 132 ntBASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Gm23007-201ENSMUST00000158951 177 ntBASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 U2af1l4-205ENSMUST00000163482 668 ntTSL 5 BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Gm18006-201ENSMUST00000177411 662 ntBASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Gm9285-201ENSMUST00000177691 697 ntBASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Gm43382-201ENSMUST00000198954 838 ntBASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Gm7499-201ENSMUST00000210423 813 ntBASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 AC112680.2-201ENSMUST00000213119 595 ntBASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 AC153557.1-201ENSMUST00000217697 403 ntBASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 AC104906.1-201ENSMUST00000218122 913 ntBASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Gm8607-201ENSMUST00000221864 431 ntBASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 AC154323.2-201ENSMUST00000226557 1151 ntBASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 AC167013.3-201ENSMUST00000228110 989 ntBASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 CT009600.1-201ENSMUST00000228771 337 ntBASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Phc1-201ENSMUST00000079560 3839 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Otud7b-203ENSMUST00000098849 8046 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Ces1g-201ENSMUST00000044602 2388 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Cnot2-202ENSMUST00000105265 2268 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Ercc6-201ENSMUST00000066807 8423 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Phc2-203ENSMUST00000106080 3885 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 D830044D21Rik-201ENSMUST00000143315 3897 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Gm44848-201ENSMUST00000207808 3234 ntBASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Nell2-201ENSMUST00000075275 2675 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Ints10-202ENSMUST00000070713 4192 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Oca2-201ENSMUST00000032633 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 AC165260.6-205ENSMUST00000224190 9762 ntBASIC7.63□□□□□ -1.19
Ccdc188F6WEU2 Dmxl2-201ENSMUST00000118163 10614 ntAPPRIS P2 TSL 5 BASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Slc2a9-205ENSMUST00000129099 3462 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Nol4-202ENSMUST00000081423 3309 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Cndp1-201ENSMUST00000070139 2818 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Gm38043-201ENSMUST00000195501 5141 ntBASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 CT025639.1-201ENSMUST00000223906 1375 ntBASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Prom1-204ENSMUST00000087442 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Ipcef1-201ENSMUST00000078070 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Zkscan1-203ENSMUST00000110962 4843 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Gm24272-201ENSMUST00000102329 98 ntBASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Gm23311-201ENSMUST00000104152 134 ntBASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Gm11649-201ENSMUST00000118214 375 ntBASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Gm15349-201ENSMUST00000121154 204 ntBASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Gm12101-201ENSMUST00000121590 390 ntBASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Esd-ps-201ENSMUST00000170684 847 ntBASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Gm8046-201ENSMUST00000172151 616 ntBASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Gm8305-201ENSMUST00000180022 1195 ntBASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Mir7008-201ENSMUST00000184398 63 ntBASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Gm28527-201ENSMUST00000185210 297 ntBASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Gm28353-201ENSMUST00000186482 570 ntBASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Gm28533-201ENSMUST00000186741 570 ntBASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Gm29238-201ENSMUST00000189709 695 ntBASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Gm45279-201ENSMUST00000210315 391 ntBASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 4930401C15Rik-201ENSMUST00000218300 865 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Gm10126-201ENSMUST00000221732 168 ntBASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Mir106b-201ENSMUST00000083580 82 ntBASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Slco1c1-206ENSMUST00000205214 2515 ntTSL 5 BASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 Hp1bp3-203ENSMUST00000105825 4618 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Ccdc188F6WEU2 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms