Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Gm24451-201ENSMUST00000083353 133 ntBASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 D5Ertd615e-202ENSMUST00000197016 3911 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Pes1-202ENSMUST00000109985 2923 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Gm14373-201ENSMUST00000122467 2158 ntBASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Gm18248-201ENSMUST00000191164 1846 ntBASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Gm13983-201ENSMUST00000118018 865 ntBASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Gm5345-201ENSMUST00000183076 1014 ntBASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Gm28976-201ENSMUST00000188070 144 ntBASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Gm42886-201ENSMUST00000199214 466 ntBASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 AC165092.4-201ENSMUST00000225025 679 ntBASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Gm43430-201ENSMUST00000196513 3897 ntBASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 AC166574.5-201ENSMUST00000227438 1432 ntBASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Slmapos2-201ENSMUST00000160089 2194 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Gm45903-201ENSMUST00000212891 2898 ntTSL 5 BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Mrpl11-201ENSMUST00000025836 2882 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Tro-205ENSMUST00000151403 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Gm15332-201ENSMUST00000118386 357 ntBASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Gm12262-201ENSMUST00000119915 305 ntBASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Gm22795-201ENSMUST00000157233 118 ntBASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Gm27299-201ENSMUST00000184593 103 ntBASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Gm21735-201ENSMUST00000190360 696 ntBASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Gm20926-201ENSMUST00000194457 696 ntBASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 AC192091.1-201ENSMUST00000218668 439 ntBASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Krtap26-1-201ENSMUST00000095934 973 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Celf2-223ENSMUST00000182851 3587 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Ube2f-203ENSMUST00000171165 5654 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Dab1-201ENSMUST00000106826 996 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Gm28507-201ENSMUST00000189737 703 ntBASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Sidt1-204ENSMUST00000127567 2901 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Wdr48-208ENSMUST00000217472 2997 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Gm15128-201ENSMUST00000112814 2027 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Gm37783-201ENSMUST00000192025 1856 ntBASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col6a3E9PWQ3 Gm9750-201ENSMUST00000142025 2017 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Gm6472-201ENSMUST00000178147 651 ntBASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 1700113B19Rik-201ENSMUST00000191817 420 ntBASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 AC159205.2-201ENSMUST00000223759 816 ntBASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Olfr1199-204ENSMUST00000213138 2657 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Dsg3-201ENSMUST00000070892 4108 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Gm26748-201ENSMUST00000180406 2972 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Me1-202ENSMUST00000185374 3292 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 A330049N07Rik-203ENSMUST00000220010 1989 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Txnip-202ENSMUST00000074519 2827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Arsg-203ENSMUST00000106697 3232 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Gm7252-201ENSMUST00000223284 456 ntBASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 AC091783.3-201ENSMUST00000223969 681 ntBASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Gm6493-201ENSMUST00000159889 1786 ntBASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 A330032B11Rik-201ENSMUST00000180609 1919 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Grm8-201ENSMUST00000090512 2830 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Gm43123-201ENSMUST00000201893 3471 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms