Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 AC155298.3-201ENSMUST00000225307 3220 ntBASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Dalir-201ENSMUST00000188773 2170 ntBASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Acaca-201ENSMUST00000020843 9026 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Scn3aA2ASI5 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Ccdc180-204ENSMUST00000178561 5081 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Mir697-201ENSMUST00000102316 109 ntBASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Gm25498-201ENSMUST00000104424 129 ntBASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Gm37295-201ENSMUST00000192186 109 ntBASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Scn3aA2ASI5 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC8.16□□□□□ -1.1
Scn3aA2ASI5 AC099934.1-201ENSMUST00000200493 79 ntBASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Gm43926-201ENSMUST00000203978 430 ntBASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Gm44508-201ENSMUST00000206943 1157 ntBASIC8.16□□□□□ -1.1
Scn3aA2ASI5 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC8.16□□□□□ -1.1
Scn3aA2ASI5 AC159188.3-201ENSMUST00000224199 880 ntBASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Arhgap21-213ENSMUST00000173194 6920 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Nrp2-205ENSMUST00000114155 6534 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Scn3aA2ASI5 AC153940.1-201ENSMUST00000220149 5300 ntBASIC8.16□□□□□ -1.1
Scn3aA2ASI5 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Scn3aA2ASI5 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Grk3-201ENSMUST00000065167 6533 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm13878-201ENSMUST00000117986 577 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm9311-201ENSMUST00000118042 1269 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm15129-201ENSMUST00000119673 279 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm3760-201ENSMUST00000167475 804 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm4373-201ENSMUST00000178571 556 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28739-201ENSMUST00000185415 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28219-201ENSMUST00000185452 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28542-201ENSMUST00000185545 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28303-201ENSMUST00000185642 747 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm29244-201ENSMUST00000185825 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm29437-201ENSMUST00000185865 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm29412-201ENSMUST00000185869 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28910-201ENSMUST00000185921 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28812-201ENSMUST00000185963 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm29468-201ENSMUST00000185978 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28335-201ENSMUST00000186204 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28854-201ENSMUST00000186218 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28636-201ENSMUST00000186353 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28452-201ENSMUST00000186623 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm29298-201ENSMUST00000186704 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28185-201ENSMUST00000186815 694 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28227-201ENSMUST00000186862 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28796-201ENSMUST00000186905 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm29659-201ENSMUST00000187063 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28473-201ENSMUST00000187325 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28558-201ENSMUST00000187373 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28682-201ENSMUST00000187430 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28738-201ENSMUST00000187480 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28949-201ENSMUST00000187805 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28773-201ENSMUST00000187925 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm29319-201ENSMUST00000188060 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm29422-201ENSMUST00000188062 694 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28734-201ENSMUST00000188104 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28787-201ENSMUST00000188357 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm29312-201ENSMUST00000188724 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm29451-201ENSMUST00000188862 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm29637-201ENSMUST00000188877 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm29033-201ENSMUST00000189114 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm29614-201ENSMUST00000189263 694 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28751-201ENSMUST00000189287 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm29559-201ENSMUST00000189412 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28272-201ENSMUST00000189512 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28483-201ENSMUST00000189519 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28123-201ENSMUST00000189725 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28368-201ENSMUST00000189804 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm29119-201ENSMUST00000189973 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28716-201ENSMUST00000190217 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm29239-201ENSMUST00000190304 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28837-201ENSMUST00000190397 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28968-201ENSMUST00000190413 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm28531-201ENSMUST00000190529 696 ntBASIC8.15□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms