Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm10744-201ENSMUST00000220184 2706 ntBASIC7.69□□□□□ -1.18
Chmp2aQ9DB34 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Chmp2aQ9DB34 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Chmp2aQ9DB34 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Chmp2aQ9DB34 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC7.69□□□□□ -1.18
Chmp2aQ9DB34 Gm38099-201ENSMUST00000193280 3170 ntBASIC7.69□□□□□ -1.18
Chmp2aQ9DB34 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Chmp2aQ9DB34 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
Chmp2aQ9DB34 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Chmp2aQ9DB34 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Chmp2aQ9DB34 Gm5841-201ENSMUST00000195307 2177 ntBASIC7.69□□□□□ -1.18
Chmp2aQ9DB34 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 CR974429.2-201ENSMUST00000221883 1696 ntBASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 A430110L20Rik-202ENSMUST00000181680 2513 ntBASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Gm22426-201ENSMUST00000103811 96 ntBASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Gm15586-201ENSMUST00000121218 528 ntBASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Gm15362-201ENSMUST00000121459 388 ntBASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Trav8-2-201ENSMUST00000130122 337 ntBASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Gm23007-201ENSMUST00000158951 177 ntBASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Mir6409-201ENSMUST00000184957 92 ntBASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Gm2505-201ENSMUST00000200413 825 ntBASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Gm43108-201ENSMUST00000200525 293 ntBASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Gm44380-201ENSMUST00000203125 293 ntBASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Gm5314-201ENSMUST00000204852 466 ntBASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 AC102582.1-201ENSMUST00000215376 378 ntBASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 CT010472.1-201ENSMUST00000224000 704 ntBASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 CT025639.2-201ENSMUST00000224440 1220 ntBASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Gm20302-201ENSMUST00000080671 275 ntBASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Gm43488-201ENSMUST00000198874 2504 ntBASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Gm18537-202ENSMUST00000206215 1503 ntBASIC7.68□□□□□ -1.18
Chmp2aQ9DB34 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Chmp2aQ9DB34 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
Chmp2aQ9DB34 Zfp438-201ENSMUST00000063989 3209 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Chmp2aQ9DB34 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC7.67□□□□□ -1.18
Chmp2aQ9DB34 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Chmp2aQ9DB34 Gm37663-201ENSMUST00000191887 2299 ntBASIC7.67□□□□□ -1.18
Chmp2aQ9DB34 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Chmp2aQ9DB34 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Chmp2aQ9DB34 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Chmp2aQ9DB34 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC7.67□□□□□ -1.18
Chmp2aQ9DB34 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
Chmp2aQ9DB34 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Chmp2aQ9DB34 Gm12306-201ENSMUST00000117256 171 ntBASIC7.67□□□□□ -1.18
Chmp2aQ9DB34 Gm7129-201ENSMUST00000117402 997 ntBASIC7.67□□□□□ -1.18
Chmp2aQ9DB34 Gm16418-201ENSMUST00000118577 171 ntBASIC7.67□□□□□ -1.18
Chmp2aQ9DB34 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC7.67□□□□□ -1.18
Chmp2aQ9DB34 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC7.67□□□□□ -1.18
Chmp2aQ9DB34 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC7.67□□□□□ -1.18
Chmp2aQ9DB34 Gm42938-201ENSMUST00000198414 1072 ntBASIC7.67□□□□□ -1.18
Chmp2aQ9DB34 Gm42584-201ENSMUST00000201404 220 ntBASIC7.67□□□□□ -1.18
Chmp2aQ9DB34 Gm34583-203ENSMUST00000202586 454 ntBASIC7.67□□□□□ -1.18
Chmp2aQ9DB34 Gm45446-201ENSMUST00000209348 216 ntBASIC7.67□□□□□ -1.18
Chmp2aQ9DB34 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Chmp2aQ9DB34 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC7.67□□□□□ -1.18
Chmp2aQ9DB34 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC7.67□□□□□ -1.18
Chmp2aQ9DB34 AC131710.2-201ENSMUST00000226773 683 ntBASIC7.67□□□□□ -1.18
Chmp2aQ9DB34 AC125087.1-201ENSMUST00000227552 514 ntBASIC7.67□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms