Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Uba1-202ENSMUST00000089217 4044 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Gm27030-201ENSMUST00000182551 464 ntBASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Ass-ps1-201ENSMUST00000197717 761 ntBASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Gm43867-201ENSMUST00000203860 525 ntBASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Gm7499-201ENSMUST00000210423 813 ntBASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Gm19324-201ENSMUST00000213229 1169 ntBASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Gm2774-201ENSMUST00000213650 1165 ntBASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Gm3678-201ENSMUST00000218888 492 ntBASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Gm6575-201ENSMUST00000222946 697 ntBASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 AC154806.1-203ENSMUST00000227370 1032 ntBASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Ralgps1-204ENSMUST00000113165 6192 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 1700074P13Rik-201ENSMUST00000031935 1647 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Gm37289-201ENSMUST00000195409 1402 ntBASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Gm37159-201ENSMUST00000192720 3605 ntBASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Gm37372-201ENSMUST00000193577 3311 ntBASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Mbnl2-203ENSMUST00000226800 3328 ntBASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Gm43123-201ENSMUST00000201893 3471 ntBASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Gm15209-201ENSMUST00000117703 400 ntBASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Gm24343-201ENSMUST00000158708 111 ntBASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Gm22655-201ENSMUST00000174949 96 ntBASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Gm26729-201ENSMUST00000180744 352 ntBASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Gm28952-201ENSMUST00000189285 681 ntBASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Gm38122-201ENSMUST00000192679 885 ntBASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Gm18995-201ENSMUST00000202981 520 ntBASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 AC137871.3-201ENSMUST00000226628 225 ntBASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 AC102139.1-201ENSMUST00000227000 251 ntBASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Irf4-202ENSMUST00000110307 4761 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Irf4-201ENSMUST00000021784 4764 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 H6pd-202ENSMUST00000084117 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh15Q99PJ1 Dpp6-203ENSMUST00000120555 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Limk2-203ENSMUST00000101642 3693 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Zmiz2-204ENSMUST00000109786 4319 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Nav2-216ENSMUST00000184945 10665 ntAPPRIS P4 TSL 5 BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Lrrc29-204ENSMUST00000210801 3830 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Mrps5-201ENSMUST00000028852 4481 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Chd7-202ENSMUST00000051558 10216 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Kif3c-204ENSMUST00000219895 2962 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Olfr775-202ENSMUST00000214109 3598 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Myt1l-205ENSMUST00000218583 4522 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Washc2-201ENSMUST00000036759 4307 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Htr2c-201ENSMUST00000036303 4747 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Slit2-208ENSMUST00000173107 9960 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Cul2-201ENSMUST00000025073 3727 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Gm26429-201ENSMUST00000104829 110 ntBASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Gm14054-201ENSMUST00000120744 704 ntBASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Gm21756-201ENSMUST00000178380 930 ntBASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Gm21405-201ENSMUST00000179024 930 ntBASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Gm27295-201ENSMUST00000184264 153 ntBASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Gm21191-201ENSMUST00000186484 930 ntBASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Gm29503-201ENSMUST00000191044 930 ntBASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Gm37920-201ENSMUST00000192952 749 ntBASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Gm2229-201ENSMUST00000193328 710 ntBASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Ighv1-27-201ENSMUST00000194473 340 ntBASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Gm18009-201ENSMUST00000203239 1016 ntBASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Gm45407-201ENSMUST00000209499 3676 ntBASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Lin54-202ENSMUST00000123572 4592 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Heatr6-201ENSMUST00000001002 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Gm38056-201ENSMUST00000193928 5027 ntBASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Gm43128-201ENSMUST00000202212 1621 ntBASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Gm37755-201ENSMUST00000195880 2179 ntBASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh15Q99PJ1 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC8.21□□□□□ -1.09
Pcdh15Q99PJ1 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Pcdh15Q99PJ1 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms