Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
Scrt1Q99M85 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.36
Scrt1Q99M85 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.36
Scrt1Q99M85 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Scrt1Q99M85 Zfp958-201ENSMUST00000073201 1401 ntTSL 5 BASIC6.59□□□□□ -1.36
Scrt1Q99M85 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Scrt1Q99M85 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Scrt1Q99M85 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Kbtbd3-201ENSMUST00000049648 2231 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Gm19031-201ENSMUST00000176280 1365 ntBASIC6.58□□□□□ -1.36
Scrt1Q99M85 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Gm13750-201ENSMUST00000117621 465 ntBASIC6.58□□□□□ -1.36
Scrt1Q99M85 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC6.58□□□□□ -1.36
Scrt1Q99M85 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Scrt1Q99M85 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Scrt1Q99M85 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Gm26025-201ENSMUST00000158655 271 ntBASIC6.58□□□□□ -1.36
Scrt1Q99M85 Gm22408-201ENSMUST00000174925 65 ntBASIC6.58□□□□□ -1.36
Scrt1Q99M85 Mir6989-201ENSMUST00000184812 65 ntBASIC6.58□□□□□ -1.36
Scrt1Q99M85 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Gm42963-201ENSMUST00000202943 1217 ntBASIC6.58□□□□□ -1.36
Scrt1Q99M85 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC6.58□□□□□ -1.36
Scrt1Q99M85 AC154785.1-201ENSMUST00000223280 572 ntBASIC6.58□□□□□ -1.36
Scrt1Q99M85 AC133958.1-201ENSMUST00000227085 961 ntBASIC6.58□□□□□ -1.36
Scrt1Q99M85 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Gm2163-201ENSMUST00000179734 2723 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC6.58□□□□□ -1.36
Scrt1Q99M85 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC6.58□□□□□ -1.36
Scrt1Q99M85 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Scrt1Q99M85 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Scrt1Q99M85 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Fancd2os-201ENSMUST00000035870 1358 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Gm43158-201ENSMUST00000198484 1555 ntBASIC6.57□□□□□ -1.36
Scrt1Q99M85 Gm44228-201ENSMUST00000204888 2026 ntBASIC6.57□□□□□ -1.36
Scrt1Q99M85 Gm43581-201ENSMUST00000196766 2864 ntBASIC6.57□□□□□ -1.36
Scrt1Q99M85 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Gm13525-201ENSMUST00000120607 478 ntBASIC6.57□□□□□ -1.36
Scrt1Q99M85 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC6.57□□□□□ -1.36
Scrt1Q99M85 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Gm10012-202ENSMUST00000170379 372 ntBASIC6.57□□□□□ -1.36
Scrt1Q99M85 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC6.57□□□□□ -1.36
Scrt1Q99M85 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC6.57□□□□□ -1.36
Scrt1Q99M85 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC6.57□□□□□ -1.36
Scrt1Q99M85 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC6.57□□□□□ -1.36
Scrt1Q99M85 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Gm42464-201ENSMUST00000196717 417 ntBASIC6.57□□□□□ -1.36
Scrt1Q99M85 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scrt1Q99M85 AC153561.1-201ENSMUST00000215943 469 ntBASIC6.57□□□□□ -1.36
Scrt1Q99M85 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC6.57□□□□□ -1.36
Scrt1Q99M85 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scrt1Q99M85 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms