Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Gm22687-201ENSMUST00000158301 105 ntBASIC8.5□□□□□ -1.05
Clp1Q99LI9 Tiam1-213ENSMUST00000163370 7255 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Gm8164-201ENSMUST00000169120 1192 ntBASIC8.5□□□□□ -1.05
Clp1Q99LI9 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC8.5□□□□□ -1.05
Clp1Q99LI9 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC8.5□□□□□ -1.05
Clp1Q99LI9 Gm5283-201ENSMUST00000177874 334 ntBASIC8.5□□□□□ -1.05
Clp1Q99LI9 Serinc3-201ENSMUST00000017851 3683 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Clp1Q99LI9 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Gm6100-201ENSMUST00000180253 403 ntBASIC8.5□□□□□ -1.05
Clp1Q99LI9 Gm5787-201ENSMUST00000183049 1038 ntBASIC8.5□□□□□ -1.05
Clp1Q99LI9 Gm29362-201ENSMUST00000187898 133 ntBASIC8.5□□□□□ -1.05
Clp1Q99LI9 Gm29435-201ENSMUST00000191310 689 ntBASIC8.5□□□□□ -1.05
Clp1Q99LI9 Gm38231-201ENSMUST00000192030 347 ntBASIC8.5□□□□□ -1.05
Clp1Q99LI9 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Ighv1-30-201ENSMUST00000194082 349 ntBASIC8.5□□□□□ -1.05
Clp1Q99LI9 Gm26413-201ENSMUST00000196783 126 ntBASIC8.5□□□□□ -1.05
Clp1Q99LI9 Gm43471-201ENSMUST00000197550 467 ntBASIC8.5□□□□□ -1.05
Clp1Q99LI9 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Clp1Q99LI9 AC155834.1-201ENSMUST00000220033 498 ntBASIC8.5□□□□□ -1.05
Clp1Q99LI9 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Ccdc187-203ENSMUST00000227200 9528 ntAPPRIS ALT2 BASIC8.5□□□□□ -1.05
Clp1Q99LI9 AC154649.2-201ENSMUST00000228189 808 ntBASIC8.5□□□□□ -1.05
Clp1Q99LI9 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Myo6-203ENSMUST00000113266 7632 ntTSL 5 BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Ap2b1-205ENSMUST00000176430 3596 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Slc12a8-201ENSMUST00000059056 3166 ntAPPRIS P2 TSL 2 BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Zmym1-201ENSMUST00000055013 3001 ntAPPRIS P2 TSL 2 BASIC8.5□□□□□ -1.05
Clp1Q99LI9 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Clp1Q99LI9 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC8.5□□□□□ -1.05
Clp1Q99LI9 Gm43062-201ENSMUST00000196302 1319 ntBASIC8.5□□□□□ -1.05
Clp1Q99LI9 Gm32552-201ENSMUST00000217849 2291 ntTSL 5 BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Gm10258-201ENSMUST00000091270 2123 ntBASIC8.5□□□□□ -1.05
Clp1Q99LI9 Cenpi-202ENSMUST00000101251 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Pax3-202ENSMUST00000087086 3863 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Gm15533-202ENSMUST00000206216 3262 ntBASIC8.49□□□□□ -1.05
Clp1Q99LI9 Bcat1-201ENSMUST00000032402 7833 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Gm42736-201ENSMUST00000200723 1353 ntBASIC8.49□□□□□ -1.05
Clp1Q99LI9 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Sema5a-201ENSMUST00000067458 10809 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Gja1-206ENSMUST00000220069 3182 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Parva-203ENSMUST00000106643 2222 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Ank3-231ENSMUST00000182884 9963 ntAPPRIS P4 TSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 2010110K18Rik-201ENSMUST00000181453 2400 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Tnfaip1-202ENSMUST00000108277 3768 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Adam5-202ENSMUST00000118419 2791 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Serpina3h-202ENSMUST00000116393 1226 ntBASIC8.49□□□□□ -1.05
Clp1Q99LI9 Mir669e-201ENSMUST00000117003 119 ntBASIC8.49□□□□□ -1.05
Clp1Q99LI9 Gm15715-201ENSMUST00000118032 283 ntBASIC8.49□□□□□ -1.05
Clp1Q99LI9 Gm15153-201ENSMUST00000119867 274 ntBASIC8.49□□□□□ -1.05
Clp1Q99LI9 Mup-ps13-201ENSMUST00000120662 545 ntBASIC8.49□□□□□ -1.05
Clp1Q99LI9 Mup-ps1-201ENSMUST00000120720 544 ntBASIC8.49□□□□□ -1.05
Clp1Q99LI9 Gm12632-201ENSMUST00000121223 495 ntBASIC8.49□□□□□ -1.05
Clp1Q99LI9 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Gm6838-201ENSMUST00000172851 582 ntBASIC8.49□□□□□ -1.05
Clp1Q99LI9 Gm27435-201ENSMUST00000183588 88 ntBASIC8.49□□□□□ -1.05
Clp1Q99LI9 Gm27315-201ENSMUST00000183977 154 ntBASIC8.49□□□□□ -1.05
Clp1Q99LI9 Gm29355-201ENSMUST00000188178 697 ntBASIC8.49□□□□□ -1.05
Clp1Q99LI9 Gm28953-201ENSMUST00000188336 697 ntBASIC8.49□□□□□ -1.05
Clp1Q99LI9 Gm20788-201ENSMUST00000190538 697 ntBASIC8.49□□□□□ -1.05
Clp1Q99LI9 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Gm31306-201ENSMUST00000197517 508 ntBASIC8.49□□□□□ -1.05
Clp1Q99LI9 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Gm45299-201ENSMUST00000210199 420 ntBASIC8.49□□□□□ -1.05
Clp1Q99LI9 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 AC162176.1-201ENSMUST00000216490 618 ntBASIC8.49□□□□□ -1.05
Clp1Q99LI9 Gm19161-201ENSMUST00000217958 737 ntBASIC8.49□□□□□ -1.05
Clp1Q99LI9 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC8.49□□□□□ -1.05
Clp1Q99LI9 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 AC165254.1-203ENSMUST00000222925 574 ntTSL 3 BASIC8.49□□□□□ -1.05
Clp1Q99LI9 AC117656.3-204ENSMUST00000225656 859 ntBASIC8.49□□□□□ -1.05
Clp1Q99LI9 AC167013.3-201ENSMUST00000228110 989 ntBASIC8.49□□□□□ -1.05
Clp1Q99LI9 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Psg19-201ENSMUST00000004657 2105 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Olfr1331-201ENSMUST00000094831 954 ntAPPRIS P2 BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Clp1Q99LI9 9530053A07Rik-201ENSMUST00000059886 7922 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Pcdhb7-201ENSMUST00000053037 3501 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Sh3bgrl2-201ENSMUST00000113215 4565 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Fer-201ENSMUST00000000129 3008 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Clp1Q99LI9 Ankrd45-202ENSMUST00000111608 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms