Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Usp54Q8BL06 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Usp54Q8BL06 Dysf-204ENSMUST00000113821 6803 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Usp54Q8BL06 Peg13-201ENSMUST00000202826 4725 ntBASIC10.38□□□□□ -0.75
Usp54Q8BL06 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Usp54Q8BL06 Gm15568-201ENSMUST00000118589 1213 ntBASIC10.38□□□□□ -0.75
Usp54Q8BL06 BC064078-201ENSMUST00000122939 570 ntBASIC10.38□□□□□ -0.75
Usp54Q8BL06 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC10.38□□□□□ -0.75
Usp54Q8BL06 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Usp54Q8BL06 Gm24176-201ENSMUST00000158928 121 ntBASIC10.38□□□□□ -0.75
Usp54Q8BL06 Gm3344-201ENSMUST00000169610 603 ntBASIC10.38□□□□□ -0.75
Usp54Q8BL06 Gm24756-201ENSMUST00000177002 96 ntBASIC10.38□□□□□ -0.75
Usp54Q8BL06 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC10.38□□□□□ -0.75
Usp54Q8BL06 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC10.38□□□□□ -0.75
Usp54Q8BL06 AC117240.1-201ENSMUST00000199436 61 ntBASIC10.38□□□□□ -0.75
Usp54Q8BL06 Gm44538-201ENSMUST00000205615 348 ntBASIC10.38□□□□□ -0.75
Usp54Q8BL06 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC10.38□□□□□ -0.75
Usp54Q8BL06 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC10.38□□□□□ -0.75
Usp54Q8BL06 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Usp54Q8BL06 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Usp54Q8BL06 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Usp54Q8BL06 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Usp54Q8BL06 Tmem43-201ENSMUST00000032183 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Usp54Q8BL06 Zfp551-201ENSMUST00000080348 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Usp54Q8BL06 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Usp54Q8BL06 Gm26575-201ENSMUST00000181714 2232 ntBASIC10.38□□□□□ -0.75
Usp54Q8BL06 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Usp54Q8BL06 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Usp54Q8BL06 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Usp54Q8BL06 Rbm12-202ENSMUST00000109604 6635 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Usp54Q8BL06 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC10.38□□□□□ -0.75
Usp54Q8BL06 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Usp54Q8BL06 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Usp54Q8BL06 Cacna1c-220ENSMUST00000189520 6570 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Usp54Q8BL06 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Usp54Q8BL06 Nlgn3-206ENSMUST00000151528 8541 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Usp54Q8BL06 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Usp54Q8BL06 Gm9874-202ENSMUST00000194957 1464 ntBASIC10.37□□□□□ -0.75
Usp54Q8BL06 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC10.37□□□□□ -0.75
Usp54Q8BL06 Mir1932-201ENSMUST00000157390 90 ntBASIC10.37□□□□□ -0.75
Usp54Q8BL06 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Usp54Q8BL06 Gm18469-201ENSMUST00000208850 439 ntBASIC10.37□□□□□ -0.75
Usp54Q8BL06 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC10.37□□□□□ -0.75
Usp54Q8BL06 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC10.37□□□□□ -0.75
Usp54Q8BL06 Gm2774-201ENSMUST00000213650 1165 ntBASIC10.37□□□□□ -0.75
Usp54Q8BL06 CT009495.1-201ENSMUST00000224221 862 ntBASIC10.37□□□□□ -0.75
Usp54Q8BL06 Zfp865-202ENSMUST00000076791 1129 ntBASIC10.37□□□□□ -0.75
Usp54Q8BL06 Mir106b-201ENSMUST00000083580 82 ntBASIC10.37□□□□□ -0.75
Usp54Q8BL06 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Usp54Q8BL06 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Usp54Q8BL06 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Usp54Q8BL06 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Usp54Q8BL06 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Usp54Q8BL06 Naa25-201ENSMUST00000042163 5447 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Usp54Q8BL06 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Usp54Q8BL06 Ank2-201ENSMUST00000044443 5775 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Usp54Q8BL06 Gm38300-201ENSMUST00000194245 1870 ntBASIC10.37□□□□□ -0.75
Usp54Q8BL06 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Usp54Q8BL06 Scn3b-202ENSMUST00000114956 4045 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Usp54Q8BL06 Wdr37-201ENSMUST00000021572 4526 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Usp54Q8BL06 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Usp54Q8BL06 AC130831.1-201ENSMUST00000224546 1474 ntBASIC10.36□□□□□ -0.75
Usp54Q8BL06 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Usp54Q8BL06 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Usp54Q8BL06 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Usp54Q8BL06 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC10.36□□□□□ -0.75
Usp54Q8BL06 Gm14070-201ENSMUST00000120773 428 ntBASIC10.36□□□□□ -0.75
Usp54Q8BL06 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Usp54Q8BL06 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Usp54Q8BL06 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Usp54Q8BL06 Gm5711-201ENSMUST00000197896 421 ntBASIC10.36□□□□□ -0.75
Usp54Q8BL06 Gm44411-201ENSMUST00000204172 349 ntBASIC10.36□□□□□ -0.75
Usp54Q8BL06 Gm44566-201ENSMUST00000207638 304 ntBASIC10.36□□□□□ -0.75
Usp54Q8BL06 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC10.36□□□□□ -0.75
Usp54Q8BL06 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC10.36□□□□□ -0.75
Usp54Q8BL06 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC10.36□□□□□ -0.75
Usp54Q8BL06 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Usp54Q8BL06 AC124395.1-201ENSMUST00000225940 707 ntBASIC10.36□□□□□ -0.75
Usp54Q8BL06 AC121997.2-202ENSMUST00000227158 939 ntBASIC10.36□□□□□ -0.75
Usp54Q8BL06 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Usp54Q8BL06 Pofut1-206ENSMUST00000123487 4143 ntTSL 2 BASIC10.36□□□□□ -0.75
Usp54Q8BL06 Kat6b-207ENSMUST00000182855 6791 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Usp54Q8BL06 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Usp54Q8BL06 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Usp54Q8BL06 4833420G17Rik-203ENSMUST00000224312 3406 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Usp54Q8BL06 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Usp54Q8BL06 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Usp54Q8BL06 Klhl1-201ENSMUST00000022666 6645 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Usp54Q8BL06 Map4k4-215ENSMUST00000195259 3719 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Usp54Q8BL06 Luzp1-203ENSMUST00000105849 7438 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Usp54Q8BL06 Scn2a-205ENSMUST00000200829 6348 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Usp54Q8BL06 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Usp54Q8BL06 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Usp54Q8BL06 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Usp54Q8BL06 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Usp54Q8BL06 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Usp54Q8BL06 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Usp54Q8BL06 Vps39-201ENSMUST00000028752 4339 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Usp54Q8BL06 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Usp54Q8BL06 Sycp1-202ENSMUST00000196988 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms