Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Gm37984-201ENSMUST00000191641 3733 ntBASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Ctnnd1-211ENSMUST00000111685 5985 ntTSL 5 BASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Ctnnd1-215ENSMUST00000111689 5961 ntTSL 5 BASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Gm25631-201ENSMUST00000104390 130 ntBASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Gm25780-201ENSMUST00000122528 253 ntBASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Gm5147-201ENSMUST00000185999 794 ntBASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Ctnnd1-220ENSMUST00000111694 6362 ntAPPRIS P5 TSL 5 BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Arhgap21-213ENSMUST00000173194 6920 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Zfp507-201ENSMUST00000061586 6693 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Gm22707-201ENSMUST00000103834 110 ntBASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Gm12468-201ENSMUST00000116189 404 ntBASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Gm15081-201ENSMUST00000119794 844 ntBASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Gm22795-201ENSMUST00000157233 118 ntBASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Gm27684-201ENSMUST00000183778 80 ntBASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 CT030166.4-201ENSMUST00000220640 404 ntBASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Gm42692-201ENSMUST00000199482 2833 ntBASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Ptpre-204ENSMUST00000209979 4959 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Tbx22-203ENSMUST00000168174 5217 ntAPPRIS P4 TSL 2 BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Gm37483-201ENSMUST00000194382 1484 ntBASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Gm10744-201ENSMUST00000220184 2706 ntBASIC8.13□□□□□ -1.11
Ccdc88cQ6VGS5 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Gm24893-201ENSMUST00000122745 369 ntBASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Gm26179-201ENSMUST00000177723 132 ntBASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Gm42804-201ENSMUST00000199701 178 ntBASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Gm18655-201ENSMUST00000214802 1090 ntBASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Gm6327-201ENSMUST00000171185 1335 ntBASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Myt1-201ENSMUST00000081125 5327 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Gm15842-201ENSMUST00000120513 618 ntBASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Gm11343-201ENSMUST00000120579 599 ntBASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Gm26025-201ENSMUST00000158655 271 ntBASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Gm6264-201ENSMUST00000160802 624 ntBASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Gm8715-201ENSMUST00000162728 531 ntBASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Ighv1-21-201ENSMUST00000194856 351 ntBASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Gm44971-201ENSMUST00000206192 337 ntBASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 AC153152.2-201ENSMUST00000223165 959 ntBASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Gm23054-201ENSMUST00000082804 162 ntBASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc88cQ6VGS5 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc88cQ6VGS5 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc88cQ6VGS5 Nsun6-204ENSMUST00000114715 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc88cQ6VGS5 Fam168a-201ENSMUST00000049053 6609 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc88cQ6VGS5 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc88cQ6VGS5 AC154828.1-201ENSMUST00000220696 2810 ntBASIC8.11□□□□□ -1.11
Ccdc88cQ6VGS5 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc88cQ6VGS5 Gm28884-201ENSMUST00000190367 3994 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc88cQ6VGS5 Gm2762-207ENSMUST00000202739 2665 ntBASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms