Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm22948-201ENSMUST00000158561 243 ntBASIC7.18□□□□□ -1.26
ClpbQ60649 Gm16580-201ENSMUST00000162696 1044 ntBASIC7.18□□□□□ -1.26
ClpbQ60649 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
ClpbQ60649 Gm6838-201ENSMUST00000172851 582 ntBASIC7.18□□□□□ -1.26
ClpbQ60649 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC7.18□□□□□ -1.26
ClpbQ60649 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
ClpbQ60649 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC7.18□□□□□ -1.26
ClpbQ60649 Mir8114-201ENSMUST00000183582 111 ntBASIC7.18□□□□□ -1.26
ClpbQ60649 Mir6340-201ENSMUST00000183857 119 ntBASIC7.18□□□□□ -1.26
ClpbQ60649 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
ClpbQ60649 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC7.18□□□□□ -1.26
ClpbQ60649 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC7.18□□□□□ -1.26
ClpbQ60649 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
ClpbQ60649 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC7.18□□□□□ -1.26
ClpbQ60649 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
ClpbQ60649 Gm40853-201ENSMUST00000221342 582 ntBASIC7.18□□□□□ -1.26
ClpbQ60649 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
ClpbQ60649 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
ClpbQ60649 Gm9255-201ENSMUST00000223225 581 ntBASIC7.18□□□□□ -1.26
ClpbQ60649 CT025552.1-201ENSMUST00000224561 521 ntBASIC7.18□□□□□ -1.26
ClpbQ60649 AC121542.2-201ENSMUST00000227529 400 ntBASIC7.18□□□□□ -1.26
ClpbQ60649 CT009550.2-201ENSMUST00000228851 399 ntBASIC7.18□□□□□ -1.26
ClpbQ60649 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
ClpbQ60649 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
ClpbQ60649 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
ClpbQ60649 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
ClpbQ60649 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
ClpbQ60649 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
ClpbQ60649 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
ClpbQ60649 Gm38173-201ENSMUST00000193126 2314 ntBASIC7.18□□□□□ -1.26
ClpbQ60649 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
ClpbQ60649 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
ClpbQ60649 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
ClpbQ60649 AC166341.5-201ENSMUST00000222206 1400 ntBASIC7.18□□□□□ -1.26
ClpbQ60649 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
ClpbQ60649 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
ClpbQ60649 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC7.18□□□□□ -1.26
ClpbQ60649 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
ClpbQ60649 Gm42546-201ENSMUST00000201584 2592 ntBASIC7.17□□□□□ -1.26
ClpbQ60649 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ClpbQ60649 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
ClpbQ60649 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
ClpbQ60649 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ClpbQ60649 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ClpbQ60649 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
ClpbQ60649 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ClpbQ60649 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
ClpbQ60649 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
ClpbQ60649 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ClpbQ60649 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ClpbQ60649 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ClpbQ60649 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ClpbQ60649 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ClpbQ60649 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ClpbQ60649 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
ClpbQ60649 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ClpbQ60649 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
ClpbQ60649 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
ClpbQ60649 Gm43533-201ENSMUST00000202933 2936 ntBASIC7.17□□□□□ -1.26
ClpbQ60649 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC7.17□□□□□ -1.26
ClpbQ60649 Gm5228-201ENSMUST00000117186 357 ntBASIC7.17□□□□□ -1.26
ClpbQ60649 Gm11474-201ENSMUST00000120814 277 ntBASIC7.17□□□□□ -1.26
ClpbQ60649 Gm12642-201ENSMUST00000121098 876 ntBASIC7.17□□□□□ -1.26
ClpbQ60649 Gm14126-201ENSMUST00000122345 395 ntBASIC7.17□□□□□ -1.26
ClpbQ60649 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
ClpbQ60649 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
ClpbQ60649 Gm26607-201ENSMUST00000180661 867 ntBASIC7.17□□□□□ -1.26
ClpbQ60649 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC7.17□□□□□ -1.26
ClpbQ60649 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC7.17□□□□□ -1.26
ClpbQ60649 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC7.17□□□□□ -1.26
ClpbQ60649 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC7.17□□□□□ -1.26
ClpbQ60649 Gm38203-201ENSMUST00000191815 245 ntBASIC7.17□□□□□ -1.26
ClpbQ60649 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC7.17□□□□□ -1.26
ClpbQ60649 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC7.17□□□□□ -1.26
ClpbQ60649 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
ClpbQ60649 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC7.17□□□□□ -1.26
ClpbQ60649 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC7.17□□□□□ -1.26
ClpbQ60649 AC102582.1-201ENSMUST00000215376 378 ntBASIC7.17□□□□□ -1.26
ClpbQ60649 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ClpbQ60649 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC7.17□□□□□ -1.26
ClpbQ60649 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
ClpbQ60649 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
ClpbQ60649 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ClpbQ60649 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ClpbQ60649 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC7.17□□□□□ -1.26
ClpbQ60649 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
ClpbQ60649 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC7.17□□□□□ -1.26
ClpbQ60649 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ClpbQ60649 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ClpbQ60649 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ClpbQ60649 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
ClpbQ60649 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
ClpbQ60649 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
ClpbQ60649 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
ClpbQ60649 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
ClpbQ60649 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
ClpbQ60649 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ClpbQ60649 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC7.17□□□□□ -1.26
ClpbQ60649 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ClpbQ60649 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms