Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm10247-201ENSMUST00000090395 333 ntBASIC8.08□□□□□ -1.12
CiitaP79621 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CiitaP79621 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
CiitaP79621 Gm37995-201ENSMUST00000194958 1714 ntBASIC8.08□□□□□ -1.12
CiitaP79621 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CiitaP79621 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
CiitaP79621 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC8.08□□□□□ -1.12
CiitaP79621 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
CiitaP79621 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC8.08□□□□□ -1.12
CiitaP79621 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC8.08□□□□□ -1.12
CiitaP79621 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CiitaP79621 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CiitaP79621 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
CiitaP79621 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC8.07□□□□□ -1.12
CiitaP79621 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC8.07□□□□□ -1.12
CiitaP79621 Gm14035-201ENSMUST00000117596 1475 ntBASIC8.07□□□□□ -1.12
CiitaP79621 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC8.07□□□□□ -1.12
CiitaP79621 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CiitaP79621 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CiitaP79621 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CiitaP79621 Gm44553-201ENSMUST00000206316 2037 ntBASIC8.07□□□□□ -1.12
CiitaP79621 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CiitaP79621 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CiitaP79621 Gm37382-201ENSMUST00000193032 1596 ntBASIC8.07□□□□□ -1.12
CiitaP79621 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC8.07□□□□□ -1.12
CiitaP79621 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
CiitaP79621 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
CiitaP79621 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
CiitaP79621 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC8.07□□□□□ -1.12
CiitaP79621 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CiitaP79621 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC8.07□□□□□ -1.12
CiitaP79621 Mir1932-201ENSMUST00000157390 90 ntBASIC8.07□□□□□ -1.12
CiitaP79621 Gm25180-201ENSMUST00000157746 115 ntBASIC8.07□□□□□ -1.12
CiitaP79621 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
CiitaP79621 Gm6428-201ENSMUST00000161062 345 ntBASIC8.07□□□□□ -1.12
CiitaP79621 Gm23139-201ENSMUST00000179454 132 ntBASIC8.07□□□□□ -1.12
CiitaP79621 Gm18501-201ENSMUST00000185363 664 ntBASIC8.07□□□□□ -1.12
CiitaP79621 Gm8004-201ENSMUST00000187782 617 ntBASIC8.07□□□□□ -1.12
CiitaP79621 Gm6472-202ENSMUST00000187973 582 ntBASIC8.07□□□□□ -1.12
CiitaP79621 Gm18875-201ENSMUST00000188563 882 ntBASIC8.07□□□□□ -1.12
CiitaP79621 Gm29496-201ENSMUST00000189854 693 ntBASIC8.07□□□□□ -1.12
CiitaP79621 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CiitaP79621 Gm7285-201ENSMUST00000198801 580 ntBASIC8.07□□□□□ -1.12
CiitaP79621 Gm45042-201ENSMUST00000207377 211 ntBASIC8.07□□□□□ -1.12
CiitaP79621 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
CiitaP79621 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC8.07□□□□□ -1.12
CiitaP79621 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC8.07□□□□□ -1.12
CiitaP79621 CT030166.4-201ENSMUST00000220640 404 ntBASIC8.07□□□□□ -1.12
CiitaP79621 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CiitaP79621 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC8.07□□□□□ -1.12
CiitaP79621 AC117949.1-201ENSMUST00000225547 419 ntBASIC8.07□□□□□ -1.12
CiitaP79621 AC122309.1-201ENSMUST00000226945 421 ntBASIC8.07□□□□□ -1.12
CiitaP79621 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
CiitaP79621 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CiitaP79621 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CiitaP79621 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CiitaP79621 CT025639.1-201ENSMUST00000223906 1375 ntBASIC8.07□□□□□ -1.12
CiitaP79621 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CiitaP79621 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CiitaP79621 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CiitaP79621 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CiitaP79621 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
CiitaP79621 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
CiitaP79621 Gm18726-201ENSMUST00000218175 2010 ntBASIC8.07□□□□□ -1.12
CiitaP79621 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
CiitaP79621 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CiitaP79621 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC8.06□□□□□ -1.12
CiitaP79621 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CiitaP79621 Prkaa1-202ENSMUST00000228218 4618 ntBASIC8.06□□□□□ -1.12
CiitaP79621 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CiitaP79621 Gm2654-201ENSMUST00000221381 1592 ntBASIC8.06□□□□□ -1.12
CiitaP79621 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CiitaP79621 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
CiitaP79621 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CiitaP79621 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
CiitaP79621 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
CiitaP79621 Tmem161b-206ENSMUST00000225069 2414 ntBASIC8.06□□□□□ -1.12
CiitaP79621 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
CiitaP79621 Gm13130-201ENSMUST00000119195 1166 ntBASIC8.06□□□□□ -1.12
CiitaP79621 Gm5135-201ENSMUST00000121100 573 ntBASIC8.06□□□□□ -1.12
CiitaP79621 Gm14787-201ENSMUST00000121236 388 ntBASIC8.06□□□□□ -1.12
CiitaP79621 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC8.06□□□□□ -1.12
CiitaP79621 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CiitaP79621 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC8.06□□□□□ -1.12
CiitaP79621 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
CiitaP79621 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CiitaP79621 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
CiitaP79621 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CiitaP79621 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC8.06□□□□□ -1.12
CiitaP79621 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC8.06□□□□□ -1.12
CiitaP79621 Gm2089-201ENSMUST00000218294 479 ntBASIC8.06□□□□□ -1.12
CiitaP79621 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC8.06□□□□□ -1.12
CiitaP79621 AC120002.1-201ENSMUST00000218456 331 ntBASIC8.06□□□□□ -1.12
CiitaP79621 CT030182.4-201ENSMUST00000223647 645 ntBASIC8.06□□□□□ -1.12
CiitaP79621 AC138604.2-201ENSMUST00000226620 921 ntBASIC8.06□□□□□ -1.12
CiitaP79621 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
CiitaP79621 Gm22504-201ENSMUST00000082963 139 ntBASIC8.06□□□□□ -1.12
CiitaP79621 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CiitaP79621 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
CiitaP79621 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms