Protein–RNA interactions for Protein: P55194

Sh3bp1, SH3 domain-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3bp1P55194 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sh3bp1P55194 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Gm26645-201ENSMUST00000181076 1316 ntBASIC8.35□□□□□ -1.07
Sh3bp1P55194 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Sh3bp1P55194 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Sh3bp1P55194 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Sh3bp1P55194 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Gm11649-201ENSMUST00000118214 375 ntBASIC8.35□□□□□ -1.07
Sh3bp1P55194 Gm13679-201ENSMUST00000118678 484 ntBASIC8.35□□□□□ -1.07
Sh3bp1P55194 Gm12123-201ENSMUST00000120348 472 ntBASIC8.35□□□□□ -1.07
Sh3bp1P55194 Gm11259-201ENSMUST00000120554 715 ntBASIC8.35□□□□□ -1.07
Sh3bp1P55194 Gm11585-201ENSMUST00000120901 569 ntBASIC8.35□□□□□ -1.07
Sh3bp1P55194 Gm13495-201ENSMUST00000121156 537 ntBASIC8.35□□□□□ -1.07
Sh3bp1P55194 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC8.35□□□□□ -1.07
Sh3bp1P55194 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Gm26351-201ENSMUST00000157532 232 ntBASIC8.35□□□□□ -1.07
Sh3bp1P55194 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Mir3072-201ENSMUST00000175610 83 ntBASIC8.35□□□□□ -1.07
Sh3bp1P55194 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Ighv1-38-201ENSMUST00000192755 349 ntBASIC8.35□□□□□ -1.07
Sh3bp1P55194 Gm36996-201ENSMUST00000194466 250 ntBASIC8.35□□□□□ -1.07
Sh3bp1P55194 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Gm44508-201ENSMUST00000206943 1157 ntBASIC8.35□□□□□ -1.07
Sh3bp1P55194 Gm45283-201ENSMUST00000210593 628 ntBASIC8.35□□□□□ -1.07
Sh3bp1P55194 AC092710.1-201ENSMUST00000221005 192 ntBASIC8.35□□□□□ -1.07
Sh3bp1P55194 AC241621.1-201ENSMUST00000224499 430 ntBASIC8.35□□□□□ -1.07
Sh3bp1P55194 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Mir146b-201ENSMUST00000093619 109 ntBASIC8.35□□□□□ -1.07
Sh3bp1P55194 A630095E13Rik-201ENSMUST00000093868 619 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Plac8-202ENSMUST00000097437 738 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sh3bp1P55194 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC8.35□□□□□ -1.07
Sh3bp1P55194 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Gm44834-201ENSMUST00000206671 1396 ntBASIC8.35□□□□□ -1.07
Sh3bp1P55194 Phf7-206ENSMUST00000228437 1373 ntBASIC8.35□□□□□ -1.07
Sh3bp1P55194 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Serpina1d-201ENSMUST00000078869 1394 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sh3bp1P55194 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC8.34□□□□□ -1.07
Sh3bp1P55194 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC8.34□□□□□ -1.07
Sh3bp1P55194 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sh3bp1P55194 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sh3bp1P55194 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sh3bp1P55194 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Sh3bp1P55194 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sh3bp1P55194 Zfp809-205ENSMUST00000215618 1313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sh3bp1P55194 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Sh3bp1P55194 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC8.34□□□□□ -1.07
Sh3bp1P55194 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sh3bp1P55194 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sh3bp1P55194 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC8.34□□□□□ -1.07
Sh3bp1P55194 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sh3bp1P55194 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Sh3bp1P55194 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sh3bp1P55194 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Sh3bp1P55194 Gm10651-201ENSMUST00000118212 609 ntBASIC8.34□□□□□ -1.07
Sh3bp1P55194 Gm8688-201ENSMUST00000118240 969 ntBASIC8.34□□□□□ -1.07
Sh3bp1P55194 Gm12687-201ENSMUST00000119752 706 ntBASIC8.34□□□□□ -1.07
Sh3bp1P55194 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC8.34□□□□□ -1.07
Sh3bp1P55194 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
Sh3bp1P55194 Gm23945-201ENSMUST00000179609 92 ntBASIC8.34□□□□□ -1.07
Sh3bp1P55194 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC8.34□□□□□ -1.07
Sh3bp1P55194 Gm19087-201ENSMUST00000191430 946 ntBASIC8.34□□□□□ -1.07
Sh3bp1P55194 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC8.34□□□□□ -1.07
Sh3bp1P55194 Gm42696-201ENSMUST00000199859 1142 ntBASIC8.34□□□□□ -1.07
Sh3bp1P55194 Gm43553-201ENSMUST00000200900 685 ntBASIC8.34□□□□□ -1.07
Sh3bp1P55194 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC8.34□□□□□ -1.07
Sh3bp1P55194 Gm44151-201ENSMUST00000204704 259 ntTSL 3 BASIC8.34□□□□□ -1.07
Sh3bp1P55194 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC8.34□□□□□ -1.07
Sh3bp1P55194 Gm17909-201ENSMUST00000207587 907 ntBASIC8.34□□□□□ -1.07
Sh3bp1P55194 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC8.34□□□□□ -1.07
Sh3bp1P55194 Gm44743-201ENSMUST00000209062 386 ntBASIC8.34□□□□□ -1.07
Sh3bp1P55194 Gm4536-201ENSMUST00000209157 542 ntBASIC8.34□□□□□ -1.07
Sh3bp1P55194 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC8.34□□□□□ -1.07
Sh3bp1P55194 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC8.34□□□□□ -1.07
Sh3bp1P55194 CT009539.1-201ENSMUST00000226465 220 ntBASIC8.34□□□□□ -1.07
Sh3bp1P55194 AC107453.3-201ENSMUST00000228205 639 ntBASIC8.34□□□□□ -1.07
Sh3bp1P55194 Gm6807-201ENSMUST00000077435 888 ntBASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms