Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm4510-201ENSMUST00000218265 427 ntBASIC7.53□□□□□ -1.2
HttP42859 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
HttP42859 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
HttP42859 Gm6494-201ENSMUST00000218604 2298 ntBASIC7.53□□□□□ -1.2
HttP42859 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
HttP42859 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
HttP42859 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC7.53□□□□□ -1.2
HttP42859 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
HttP42859 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
HttP42859 Zbtb43-201ENSMUST00000028125 4998 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
HttP42859 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
HttP42859 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC7.53□□□□□ -1.2
HttP42859 Gm42444-201ENSMUST00000199366 4558 ntBASIC7.52□□□□□ -1.2
HttP42859 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
HttP42859 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
HttP42859 Gm24733-201ENSMUST00000158863 253 ntBASIC7.52□□□□□ -1.21
HttP42859 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC7.52□□□□□ -1.21
HttP42859 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC7.52□□□□□ -1.21
HttP42859 Gm8256-203ENSMUST00000228692 591 ntBASIC7.52□□□□□ -1.21
HttP42859 Gm2840-201ENSMUST00000048361 411 ntBASIC7.52□□□□□ -1.21
HttP42859 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HttP42859 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
HttP42859 Kalrn-204ENSMUST00000114949 3618 ntTSL 5 BASIC7.52□□□□□ -1.21
HttP42859 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
HttP42859 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HttP42859 Cdc6-201ENSMUST00000092706 4614 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
HttP42859 Gm44104-201ENSMUST00000204736 3777 ntBASIC7.52□□□□□ -1.21
HttP42859 Synrg-202ENSMUST00000092834 7115 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
HttP42859 AC125328.1-201ENSMUST00000226812 2265 ntBASIC7.52□□□□□ -1.21
HttP42859 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HttP42859 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC7.52□□□□□ -1.21
HttP42859 Gm40841-202ENSMUST00000222823 3989 ntTSL 5 BASIC7.52□□□□□ -1.21
HttP42859 Gm12959-201ENSMUST00000119396 403 ntBASIC7.52□□□□□ -1.21
HttP42859 Gm22106-201ENSMUST00000122544 127 ntBASIC7.52□□□□□ -1.21
HttP42859 Gm16112-201ENSMUST00000159075 382 ntBASIC7.52□□□□□ -1.21
HttP42859 Gm18700-201ENSMUST00000185791 553 ntBASIC7.52□□□□□ -1.21
HttP42859 AC164436.1-201ENSMUST00000227074 772 ntBASIC7.52□□□□□ -1.21
HttP42859 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
HttP42859 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
HttP42859 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
HttP42859 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
HttP42859 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.21
HttP42859 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
HttP42859 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC7.52□□□□□ -1.21
HttP42859 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
HttP42859 Gm17076-201ENSMUST00000165185 1401 ntBASIC7.52□□□□□ -1.21
HttP42859 A530021J07Rik-202ENSMUST00000207727 1406 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HttP42859 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
HttP42859 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
HttP42859 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
HttP42859 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC7.52□□□□□ -1.21
HttP42859 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC7.52□□□□□ -1.21
HttP42859 Gm22714-201ENSMUST00000116894 78 ntBASIC7.52□□□□□ -1.21
HttP42859 Gm23426-201ENSMUST00000122483 318 ntBASIC7.52□□□□□ -1.21
HttP42859 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HttP42859 Gm27024-201ENSMUST00000182561 755 ntBASIC7.52□□□□□ -1.21
HttP42859 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC7.52□□□□□ -1.21
HttP42859 Gm18586-201ENSMUST00000217265 518 ntBASIC7.52□□□□□ -1.21
HttP42859 AC154324.1-201ENSMUST00000226711 814 ntBASIC7.52□□□□□ -1.21
HttP42859 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
HttP42859 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
HttP42859 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
HttP42859 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
HttP42859 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
HttP42859 Fgf6-201ENSMUST00000000187 4657 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HttP42859 Gpm6b-203ENSMUST00000112224 4644 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HttP42859 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HttP42859 9130214F15Rik-201ENSMUST00000208727 1653 ntBASIC7.51□□□□□ -1.21
HttP42859 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HttP42859 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HttP42859 Erc1-203ENSMUST00000183703 8760 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
HttP42859 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HttP42859 Gm43335-201ENSMUST00000198299 3276 ntBASIC7.51□□□□□ -1.21
HttP42859 Gm12618-201ENSMUST00000121754 483 ntBASIC7.51□□□□□ -1.21
HttP42859 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC7.51□□□□□ -1.21
HttP42859 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC7.51□□□□□ -1.21
HttP42859 Gm27299-201ENSMUST00000184593 103 ntBASIC7.51□□□□□ -1.21
HttP42859 Gm42443-201ENSMUST00000198084 1155 ntBASIC7.51□□□□□ -1.21
HttP42859 Gm43560-201ENSMUST00000198100 773 ntBASIC7.51□□□□□ -1.21
HttP42859 Gm2774-201ENSMUST00000213650 1165 ntBASIC7.51□□□□□ -1.21
HttP42859 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HttP42859 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HttP42859 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HttP42859 Wee2-201ENSMUST00000038907 2884 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HttP42859 Gm19024-201ENSMUST00000194681 1319 ntBASIC7.51□□□□□ -1.21
HttP42859 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC7.51□□□□□ -1.21
HttP42859 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HttP42859 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HttP42859 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC7.51□□□□□ -1.21
HttP42859 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HttP42859 Otx2-210ENSMUST00000227404 2086 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
HttP42859 Arhgef3-201ENSMUST00000049206 3585 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HttP42859 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
HttP42859 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
HttP42859 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
HttP42859 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
HttP42859 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
HttP42859 Gm15601-201ENSMUST00000122972 4033 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HttP42859 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
HttP42859 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms