Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 AC112680.2-201ENSMUST00000213119 595 ntBASIC9.68□□□□□ -0.86
Col18a1P39061 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC9.68□□□□□ -0.86
Col18a1P39061 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC9.68□□□□□ -0.86
Col18a1P39061 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC9.68□□□□□ -0.86
Col18a1P39061 Gm19195-201ENSMUST00000222018 511 ntBASIC9.68□□□□□ -0.86
Col18a1P39061 AC154616.2-201ENSMUST00000227978 398 ntBASIC9.68□□□□□ -0.86
Col18a1P39061 Ucp2-202ENSMUST00000126534 3988 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Col18a1P39061 Gm20731-201ENSMUST00000193462 2288 ntBASIC9.67□□□□□ -0.86
Col18a1P39061 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Col18a1P39061 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Col18a1P39061 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Col18a1P39061 Aplnr-201ENSMUST00000057019 3699 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Col18a1P39061 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Col18a1P39061 Mertk-201ENSMUST00000014505 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Col18a1P39061 Parpbp-201ENSMUST00000048518 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Col18a1P39061 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Col18a1P39061 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Col18a1P39061 Arhgap27-201ENSMUST00000041385 3512 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Col18a1P39061 Ncor1-202ENSMUST00000037575 4246 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Col18a1P39061 Gucy2c-201ENSMUST00000032338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Col18a1P39061 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Col18a1P39061 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Col18a1P39061 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC9.67□□□□□ -0.86
Col18a1P39061 Gfpt2-201ENSMUST00000020629 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Col18a1P39061 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Col18a1P39061 Gm13489-201ENSMUST00000121234 971 ntBASIC9.67□□□□□ -0.86
Col18a1P39061 Gm36991-201ENSMUST00000191800 648 ntBASIC9.67□□□□□ -0.86
Col18a1P39061 Gm18995-201ENSMUST00000202981 520 ntBASIC9.67□□□□□ -0.86
Col18a1P39061 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC9.67□□□□□ -0.86
Col18a1P39061 AC173345.3-201ENSMUST00000221245 1093 ntBASIC9.67□□□□□ -0.86
Col18a1P39061 AC160962.2-201ENSMUST00000224761 632 ntBASIC9.67□□□□□ -0.86
Col18a1P39061 AC161252.1-201ENSMUST00000225536 467 ntBASIC9.67□□□□□ -0.86
Col18a1P39061 Olfr519-201ENSMUST00000084752 960 ntBASIC9.67□□□□□ -0.86
Col18a1P39061 Zbtb43-201ENSMUST00000028125 4998 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Col18a1P39061 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Col18a1P39061 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Col18a1P39061 Grik2-201ENSMUST00000079751 2610 ntTSL 2 BASIC9.67□□□□□ -0.86
Col18a1P39061 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Col18a1P39061 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Col18a1P39061 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Col18a1P39061 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Col18a1P39061 Gm18716-201ENSMUST00000204507 1603 ntBASIC9.67□□□□□ -0.86
Col18a1P39061 Adamtsl3-203ENSMUST00000173287 7249 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Col18a1P39061 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Col18a1P39061 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Col18a1P39061 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC9.66□□□□□ -0.86
Col18a1P39061 Gm8049-201ENSMUST00000214336 1782 ntBASIC9.66□□□□□ -0.86
Col18a1P39061 Ccr6-201ENSMUST00000097418 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col18a1P39061 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col18a1P39061 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Col18a1P39061 Gm44699-201ENSMUST00000208229 5083 ntTSL 5 BASIC9.66□□□□□ -0.86
Col18a1P39061 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col18a1P39061 Gm11590-201ENSMUST00000118999 1455 ntBASIC9.66□□□□□ -0.86
Col18a1P39061 Gm8250-201ENSMUST00000117398 774 ntBASIC9.66□□□□□ -0.86
Col18a1P39061 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC9.66□□□□□ -0.86
Col18a1P39061 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC9.66□□□□□ -0.86
Col18a1P39061 Gm38237-201ENSMUST00000193366 376 ntBASIC9.66□□□□□ -0.86
Col18a1P39061 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC9.66□□□□□ -0.86
Col18a1P39061 Gm45734-201ENSMUST00000211916 411 ntBASIC9.66□□□□□ -0.86
Col18a1P39061 Gm35619-201ENSMUST00000222548 600 ntBASIC9.66□□□□□ -0.86
Col18a1P39061 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col18a1P39061 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Col18a1P39061 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Col18a1P39061 Pde6h-202ENSMUST00000137768 5940 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col18a1P39061 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col18a1P39061 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC9.66□□□□□ -0.86
Col18a1P39061 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Col18a1P39061 Emc1-205ENSMUST00000179784 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col18a1P39061 Palb2-202ENSMUST00000098068 3750 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col18a1P39061 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col18a1P39061 Gm37150-201ENSMUST00000193900 2754 ntBASIC9.66□□□□□ -0.86
Col18a1P39061 Trcg1-201ENSMUST00000093837 2701 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Col18a1P39061 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Col18a1P39061 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col18a1P39061 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Col18a1P39061 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC9.65□□□□□ -0.86
Col18a1P39061 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
Col18a1P39061 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Col18a1P39061 Gm12842-201ENSMUST00000117298 476 ntBASIC9.65□□□□□ -0.86
Col18a1P39061 Gm13835-201ENSMUST00000118459 685 ntBASIC9.65□□□□□ -0.86
Col18a1P39061 Gm5390-201ENSMUST00000119069 1230 ntBASIC9.65□□□□□ -0.86
Col18a1P39061 Gm6368-201ENSMUST00000119727 2147 ntBASIC9.65□□□□□ -0.86
Col18a1P39061 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC9.65□□□□□ -0.86
Col18a1P39061 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Col18a1P39061 Gm23958-201ENSMUST00000157207 105 ntBASIC9.65□□□□□ -0.86
Col18a1P39061 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Col18a1P39061 Gm20432-201ENSMUST00000173716 250 ntBASIC9.65□□□□□ -0.86
Col18a1P39061 Gm25574-201ENSMUST00000175245 249 ntBASIC9.65□□□□□ -0.86
Col18a1P39061 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC9.65□□□□□ -0.86
Col18a1P39061 Gm21542-201ENSMUST00000182307 993 ntBASIC9.65□□□□□ -0.86
Col18a1P39061 Gm5345-201ENSMUST00000183076 1014 ntBASIC9.65□□□□□ -0.86
Col18a1P39061 Mir7674-201ENSMUST00000184964 63 ntBASIC9.65□□□□□ -0.86
Col18a1P39061 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Col18a1P39061 Gm28918-201ENSMUST00000188822 699 ntBASIC9.65□□□□□ -0.86
Col18a1P39061 Gm32983-201ENSMUST00000208500 505 ntBASIC9.65□□□□□ -0.86
Col18a1P39061 AC120375.2-202ENSMUST00000228722 397 ntBASIC9.65□□□□□ -0.86
Col18a1P39061 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Col18a1P39061 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Col18a1P39061 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Col18a1P39061 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms