Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cd28P31041 Gm9761-201ENSMUST00000075650 492 ntBASIC6.36□□□□□ -1.39
Cd28P31041 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cd28P31041 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cd28P31041 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cd28P31041 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Cd28P31041 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC6.36□□□□□ -1.39
Cd28P31041 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Cd28P31041 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Cd28P31041 AC163660.4-201ENSMUST00000224983 2171 ntBASIC6.35□□□□□ -1.39
Cd28P31041 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cd28P31041 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cd28P31041 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Cd28P31041 AC135083.2-201ENSMUST00000228599 1456 ntBASIC6.35□□□□□ -1.39
Cd28P31041 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Cd28P31041 Gm43707-201ENSMUST00000196451 3187 ntBASIC6.35□□□□□ -1.39
Cd28P31041 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cd28P31041 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cd28P31041 Gm12253-201ENSMUST00000108825 1356 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Cd28P31041 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Cd28P31041 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Cd28P31041 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cd28P31041 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cd28P31041 AC140280.1-201ENSMUST00000227826 1847 ntBASIC6.35□□□□□ -1.39
Cd28P31041 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cd28P31041 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cd28P31041 Gm23192-201ENSMUST00000102434 96 ntBASIC6.35□□□□□ -1.39
Cd28P31041 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Cd28P31041 Gm2237-201ENSMUST00000112595 471 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cd28P31041 Gm13282-201ENSMUST00000121577 545 ntBASIC6.35□□□□□ -1.39
Cd28P31041 Gm16150-201ENSMUST00000127620 437 ntTSL 5 BASIC6.35□□□□□ -1.39
Cd28P31041 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC6.35□□□□□ -1.39
Cd28P31041 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC6.35□□□□□ -1.39
Cd28P31041 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC6.35□□□□□ -1.39
Cd28P31041 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cd28P31041 Csnk2b-203ENSMUST00000173114 917 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cd28P31041 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
Cd28P31041 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC6.35□□□□□ -1.39
Cd28P31041 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC6.35□□□□□ -1.39
Cd28P31041 Mir6340-201ENSMUST00000183857 119 ntBASIC6.35□□□□□ -1.39
Cd28P31041 Gm14214-201ENSMUST00000184654 678 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Cd28P31041 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cd28P31041 D7Ertd128e-201ENSMUST00000189744 928 ntTSL 2 BASIC6.35□□□□□ -1.39
Cd28P31041 Gm43310-201ENSMUST00000198975 820 ntBASIC6.35□□□□□ -1.39
Cd28P31041 Iglc1-201ENSMUST00000200568 454 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Cd28P31041 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Cd28P31041 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC6.35□□□□□ -1.39
Cd28P31041 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Cd28P31041 Gm34597-201ENSMUST00000211189 633 ntTSL 5 BASIC6.35□□□□□ -1.39
Cd28P31041 AC134607.1-201ENSMUST00000214707 485 ntBASIC6.35□□□□□ -1.39
Cd28P31041 Gm4977-201ENSMUST00000215709 1262 ntBASIC6.35□□□□□ -1.39
Cd28P31041 AC152946.3-201ENSMUST00000219424 280 ntBASIC6.35□□□□□ -1.39
Cd28P31041 Gm18504-201ENSMUST00000220917 929 ntBASIC6.35□□□□□ -1.39
Cd28P31041 AC126554.3-201ENSMUST00000223131 493 ntBASIC6.35□□□□□ -1.39
Cd28P31041 CT030170.6-202ENSMUST00000223186 544 ntBASIC6.35□□□□□ -1.39
Cd28P31041 Gm5564-201ENSMUST00000034916 967 ntBASIC6.35□□□□□ -1.39
Cd28P31041 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
Cd28P31041 Pglyrp4-201ENSMUST00000047745 1218 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cd28P31041 Fam136b-ps-201ENSMUST00000068987 412 ntBASIC6.35□□□□□ -1.39
Cd28P31041 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Cd28P31041 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Cd28P31041 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Cd28P31041 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cd28P31041 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cd28P31041 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cd28P31041 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cd28P31041 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cd28P31041 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Cd28P31041 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cd28P31041 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC6.34□□□□□ -1.39
Cd28P31041 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cd28P31041 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cd28P31041 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cd28P31041 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Cd28P31041 AC139941.2-201ENSMUST00000221565 1824 ntBASIC6.34□□□□□ -1.39
Cd28P31041 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC6.34□□□□□ -1.39
Cd28P31041 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Cd28P31041 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cd28P31041 Gm44916-201ENSMUST00000208664 2194 ntBASIC6.34□□□□□ -1.39
Cd28P31041 Gm10855-201ENSMUST00000100426 2541 ntBASIC6.34□□□□□ -1.39
Cd28P31041 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.39
Cd28P31041 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cd28P31041 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cd28P31041 AC158115.1-201ENSMUST00000222830 3182 ntBASIC6.34□□□□□ -1.39
Cd28P31041 Gm25232-201ENSMUST00000104502 132 ntBASIC6.34□□□□□ -1.39
Cd28P31041 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Cd28P31041 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cd28P31041 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC6.34□□□□□ -1.39
Cd28P31041 Gm11945-201ENSMUST00000120551 476 ntBASIC6.34□□□□□ -1.39
Cd28P31041 1700056N10Rik-201ENSMUST00000141875 1043 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cd28P31041 Gm12514-201ENSMUST00000142782 568 ntTSL 3 BASIC6.34□□□□□ -1.39
Cd28P31041 Gm14242-201ENSMUST00000145204 375 ntTSL 5 BASIC6.34□□□□□ -1.39
Cd28P31041 Gm17033-201ENSMUST00000146663 593 ntTSL 3 BASIC6.34□□□□□ -1.39
Cd28P31041 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC6.34□□□□□ -1.39
Cd28P31041 Gm8813-201ENSMUST00000155930 595 ntBASIC6.34□□□□□ -1.39
Cd28P31041 Gm24994-201ENSMUST00000157414 121 ntBASIC6.34□□□□□ -1.39
Cd28P31041 Gm26351-201ENSMUST00000157532 232 ntBASIC6.34□□□□□ -1.39
Cd28P31041 Fxyd5-207ENSMUST00000161684 1172 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cd28P31041 Traj54-201ENSMUST00000165071 54 ntBASIC6.34□□□□□ -1.39
Cd28P31041 Gm22408-201ENSMUST00000174925 65 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms