Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm43502-201ENSMUST00000200263 2596 ntBASIC5.92□□□□□ -1.46
Sdc1P18828 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Sdc1P18828 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Sdc1P18828 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Sdc1P18828 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sdc1P18828 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Sdc1P18828 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
Sdc1P18828 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sdc1P18828 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC5.91□□□□□ -1.46
Sdc1P18828 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC5.91□□□□□ -1.46
Sdc1P18828 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Sdc1P18828 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sdc1P18828 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Sdc1P18828 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Sdc1P18828 AC114585.1-201ENSMUST00000228080 3680 ntBASIC5.91□□□□□ -1.46
Sdc1P18828 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sdc1P18828 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sdc1P18828 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sdc1P18828 AC123705.1-201ENSMUST00000222512 2058 ntBASIC5.91□□□□□ -1.46
Sdc1P18828 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Sdc1P18828 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
Sdc1P18828 Gm5400-201ENSMUST00000118494 943 ntBASIC5.91□□□□□ -1.46
Sdc1P18828 Gm6067-201ENSMUST00000121648 491 ntBASIC5.91□□□□□ -1.46
Sdc1P18828 Gm25804-201ENSMUST00000122785 188 ntBASIC5.91□□□□□ -1.46
Sdc1P18828 Gm15343-201ENSMUST00000136382 640 ntTSL 3 BASIC5.91□□□□□ -1.46
Sdc1P18828 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC5.91□□□□□ -1.46
Sdc1P18828 Mir1983-201ENSMUST00000157523 132 ntBASIC5.91□□□□□ -1.46
Sdc1P18828 Gm25265-201ENSMUST00000158520 347 ntBASIC5.91□□□□□ -1.46
Sdc1P18828 1700009J07Rik-201ENSMUST00000178996 912 ntTSL 5 BASIC5.91□□□□□ -1.46
Sdc1P18828 Gm6669-201ENSMUST00000179088 997 ntBASIC5.91□□□□□ -1.46
Sdc1P18828 Mir6354-201ENSMUST00000184979 116 ntBASIC5.91□□□□□ -1.46
Sdc1P18828 Gm6644-201ENSMUST00000186507 951 ntBASIC5.91□□□□□ -1.46
Sdc1P18828 Gm37322-201ENSMUST00000193409 337 ntBASIC5.91□□□□□ -1.46
Sdc1P18828 Gm42908-201ENSMUST00000197508 870 ntBASIC5.91□□□□□ -1.46
Sdc1P18828 Gm43929-201ENSMUST00000203025 409 ntBASIC5.91□□□□□ -1.46
Sdc1P18828 Gm3774-201ENSMUST00000209773 435 ntBASIC5.91□□□□□ -1.46
Sdc1P18828 Gm4972-201ENSMUST00000211108 1254 ntBASIC5.91□□□□□ -1.46
Sdc1P18828 Gm32567-201ENSMUST00000211244 682 ntTSL 5 BASIC5.91□□□□□ -1.46
Sdc1P18828 Gm46313-201ENSMUST00000220463 547 ntBASIC5.91□□□□□ -1.46
Sdc1P18828 Gm46317-201ENSMUST00000221103 393 ntBASIC5.91□□□□□ -1.46
Sdc1P18828 AC091783.3-201ENSMUST00000223969 681 ntBASIC5.91□□□□□ -1.46
Sdc1P18828 AC147096.1-201ENSMUST00000227648 352 ntBASIC5.91□□□□□ -1.46
Sdc1P18828 AC154806.1-202ENSMUST00000227949 885 ntBASIC5.91□□□□□ -1.46
Sdc1P18828 Psors1c2-201ENSMUST00000025273 843 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sdc1P18828 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sdc1P18828 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Sdc1P18828 Rab38-201ENSMUST00000107256 1577 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sdc1P18828 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sdc1P18828 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sdc1P18828 Gm42820-201ENSMUST00000200084 3063 ntBASIC5.91□□□□□ -1.46
Sdc1P18828 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sdc1P18828 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Sdc1P18828 Gm38380-201ENSMUST00000195718 2248 ntBASIC5.91□□□□□ -1.46
Sdc1P18828 Klf5-202ENSMUST00000226784 2852 ntBASIC5.91□□□□□ -1.46
Sdc1P18828 Gm17083-201ENSMUST00000165849 1366 ntBASIC5.91□□□□□ -1.46
Sdc1P18828 Gm38077-201ENSMUST00000193657 3245 ntBASIC5.91□□□□□ -1.46
Sdc1P18828 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sdc1P18828 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sdc1P18828 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Sdc1P18828 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Sdc1P18828 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Sdc1P18828 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sdc1P18828 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC5.9□□□□□ -1.46
Sdc1P18828 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sdc1P18828 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Sdc1P18828 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sdc1P18828 Gm3608-201ENSMUST00000086725 2858 ntBASIC5.9□□□□□ -1.46
Sdc1P18828 Zranb1-201ENSMUST00000033265 2210 ntAPPRIS P2 TSL 2 BASIC5.9□□□□□ -1.46
Sdc1P18828 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sdc1P18828 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Sdc1P18828 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Sdc1P18828 Ucma-202ENSMUST00000115010 847 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sdc1P18828 Gm13400-201ENSMUST00000117436 380 ntBASIC5.9□□□□□ -1.46
Sdc1P18828 Gm12611-201ENSMUST00000119452 1037 ntBASIC5.9□□□□□ -1.46
Sdc1P18828 Gm12464-201ENSMUST00000121385 1016 ntBASIC5.9□□□□□ -1.46
Sdc1P18828 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC5.9□□□□□ -1.46
Sdc1P18828 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Sdc1P18828 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC5.9□□□□□ -1.46
Sdc1P18828 Gm26040-201ENSMUST00000158147 161 ntBASIC5.9□□□□□ -1.46
Sdc1P18828 Gm3571-201ENSMUST00000170703 1060 ntBASIC5.9□□□□□ -1.46
Sdc1P18828 Gm6871-204ENSMUST00000171059 462 ntTSL 5 BASIC5.9□□□□□ -1.46
Sdc1P18828 Mir3471-2-201ENSMUST00000174896 102 ntBASIC5.9□□□□□ -1.46
Sdc1P18828 Gm18353-201ENSMUST00000185906 784 ntBASIC5.9□□□□□ -1.46
Sdc1P18828 Gm29357-201ENSMUST00000186877 698 ntBASIC5.9□□□□□ -1.46
Sdc1P18828 Gm29562-201ENSMUST00000190113 904 ntBASIC5.9□□□□□ -1.46
Sdc1P18828 Tmem265-202ENSMUST00000190278 587 ntTSL 3 BASIC5.9□□□□□ -1.46
Sdc1P18828 Gm2474-201ENSMUST00000195162 559 ntBASIC5.9□□□□□ -1.46
Sdc1P18828 Gm43275-201ENSMUST00000202053 1020 ntBASIC5.9□□□□□ -1.46
Sdc1P18828 Gm5154-201ENSMUST00000203971 399 ntBASIC5.9□□□□□ -1.46
Sdc1P18828 Gm29977-201ENSMUST00000206804 724 ntBASIC5.9□□□□□ -1.46
Sdc1P18828 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC5.9□□□□□ -1.46
Sdc1P18828 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC5.9□□□□□ -1.46
Sdc1P18828 AC126554.3-201ENSMUST00000223131 493 ntBASIC5.9□□□□□ -1.46
Sdc1P18828 Gm19154-201ENSMUST00000223330 940 ntBASIC5.9□□□□□ -1.46
Sdc1P18828 AC163038.1-201ENSMUST00000223632 1142 ntBASIC5.9□□□□□ -1.46
Sdc1P18828 AC163038.4-201ENSMUST00000224942 474 ntBASIC5.9□□□□□ -1.46
Sdc1P18828 Ucma-201ENSMUST00000027978 756 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Sdc1P18828 Ubd-201ENSMUST00000038844 931 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sdc1P18828 Klk1b11-201ENSMUST00000007156 863 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sdc1P18828 Snora65-201ENSMUST00000083190 130 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms