Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gm21152-201ENSMUST00000190271 3483 ntBASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Gm22661-201ENSMUST00000104192 132 ntBASIC6.38□□□□□ -1.39
Igh-VJ558P01758 n-R5s72-201ENSMUST00000104518 119 ntBASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Gm13742-201ENSMUST00000118805 457 ntBASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Gm15481-201ENSMUST00000120264 539 ntBASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Gm12920-201ENSMUST00000121818 1186 ntBASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Gm15843-201ENSMUST00000146593 529 ntBASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Gm38337-201ENSMUST00000193986 599 ntBASIC6.38□□□□□ -1.39
Igh-VJ558P01758 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Gm20223-201ENSMUST00000199932 805 ntBASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Gm43558-201ENSMUST00000200155 210 ntBASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC6.38□□□□□ -1.39
Igh-VJ558P01758 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC6.38□□□□□ -1.39
Igh-VJ558P01758 AC124778.1-201ENSMUST00000216013 162 ntBASIC6.38□□□□□ -1.39
Igh-VJ558P01758 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC6.38□□□□□ -1.39
Igh-VJ558P01758 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Igh-VJ558P01758 CT010472.1-201ENSMUST00000224000 704 ntBASIC6.38□□□□□ -1.39
Igh-VJ558P01758 AC121997.2-202ENSMUST00000227158 939 ntBASIC6.38□□□□□ -1.39
Igh-VJ558P01758 AC124715.1-201ENSMUST00000228480 754 ntBASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Gm5815-201ENSMUST00000050706 1185 ntBASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Gm24613-201ENSMUST00000083266 130 ntBASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Igh-VJ558P01758 AC166574.5-201ENSMUST00000227438 1432 ntBASIC6.38□□□□□ -1.39
Igh-VJ558P01758 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Keg1-201ENSMUST00000025598 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Igh-VJ558P01758 AC159635.1-201ENSMUST00000220905 2102 ntBASIC6.38□□□□□ -1.39
Igh-VJ558P01758 AC135119.1-202ENSMUST00000228435 2203 ntBASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Igh-VJ558P01758 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Igh-VJ558P01758 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Gm14226-201ENSMUST00000130870 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Gm26945-201ENSMUST00000183191 2011 ntBASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Gm24373-201ENSMUST00000104393 132 ntBASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Gm13545-201ENSMUST00000119044 482 ntBASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Gm12123-201ENSMUST00000120348 472 ntBASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Gm2735-201ENSMUST00000136133 277 ntBASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Mir1231-201ENSMUST00000175639 81 ntBASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Gm25947-201ENSMUST00000180343 110 ntBASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Gm5272-201ENSMUST00000182730 982 ntBASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Mir6409-201ENSMUST00000184957 92 ntBASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Gm5334-201ENSMUST00000187472 720 ntBASIC6.37□□□□□ -1.39
Igh-VJ558P01758 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Gm43212-201ENSMUST00000198208 394 ntBASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC6.37□□□□□ -1.39
Igh-VJ558P01758 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Gm6993-201ENSMUST00000219110 210 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 AC157571.1-201ENSMUST00000222014 520 ntBASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms