Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Tdrd3-205ENSMUST00000170865 2530 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Gm11590-201ENSMUST00000118999 1455 ntBASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Nbr1-205ENSMUST00000107212 4168 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.28
Col6a3E9PWQ3 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Col6a3E9PWQ3 Mir674-201ENSMUST00000102421 100 ntBASIC7.09□□□□□ -1.28
Col6a3E9PWQ3 Gm15801-201ENSMUST00000120920 522 ntBASIC7.09□□□□□ -1.28
Col6a3E9PWQ3 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC7.09□□□□□ -1.28
Col6a3E9PWQ3 Gm24286-201ENSMUST00000157632 128 ntBASIC7.09□□□□□ -1.28
Col6a3E9PWQ3 Gm8783-201ENSMUST00000159764 522 ntBASIC7.09□□□□□ -1.28
Col6a3E9PWQ3 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC7.09□□□□□ -1.28
Col6a3E9PWQ3 Gm21850-201ENSMUST00000179792 359 ntBASIC7.09□□□□□ -1.28
Col6a3E9PWQ3 Gm28846-201ENSMUST00000189161 368 ntBASIC7.09□□□□□ -1.28
Col6a3E9PWQ3 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC7.09□□□□□ -1.28
Col6a3E9PWQ3 Gm5582-201ENSMUST00000075251 522 ntBASIC7.09□□□□□ -1.28
Col6a3E9PWQ3 Mir188-201ENSMUST00000083464 68 ntBASIC7.09□□□□□ -1.28
Col6a3E9PWQ3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Abce1-201ENSMUST00000080536 3793 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Gm12743-201ENSMUST00000126668 3700 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Elp3-203ENSMUST00000225355 2771 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Cfap43-205ENSMUST00000160247 5264 ntTSL 5 BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Timeless-206ENSMUST00000105245 4402 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Gm14466-201ENSMUST00000119028 451 ntBASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Gm20432-201ENSMUST00000173716 250 ntBASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Gm19560-201ENSMUST00000177510 514 ntBASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Gm28023-201ENSMUST00000184556 60 ntBASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Gm27825-201ENSMUST00000184586 60 ntBASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Gm7832-201ENSMUST00000202613 880 ntBASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Flrt3-201ENSMUST00000056760 3334 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Muc13-202ENSMUST00000115044 2969 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Luzp2-201ENSMUST00000082373 4901 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Gm43537-201ENSMUST00000199064 3110 ntBASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Gm37430-201ENSMUST00000193039 196 ntBASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Gm46203-201ENSMUST00000218130 478 ntBASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 AC161884.2-201ENSMUST00000224513 227 ntBASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Gm26003-201ENSMUST00000083061 113 ntBASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Kcna4-201ENSMUST00000037012 4792 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Gm43917-201ENSMUST00000191984 2360 ntBASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Gm8844-201ENSMUST00000119460 2614 ntBASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Mbtps1-202ENSMUST00000098362 4336 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col6a3E9PWQ3 Gm11197-201ENSMUST00000145158 839 ntBASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 AC160338.2-201ENSMUST00000215508 281 ntTSL 5 BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 AC131745.2-201ENSMUST00000225736 565 ntBASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Olfr117-203ENSMUST00000215414 3498 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Olfr314-202ENSMUST00000205189 2647 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 CT025619.3-201ENSMUST00000216299 3267 ntBASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Gm20110-201ENSMUST00000218263 2095 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 AC154270.2-201ENSMUST00000226755 2306 ntBASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Unc13d-201ENSMUST00000075036 3967 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Gm24011-201ENSMUST00000157732 268 ntBASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Mir1970-201ENSMUST00000157839 104 ntBASIC7.07□□□□□ -1.28
Col6a3E9PWQ3 Mir5103-201ENSMUST00000175111 79 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms