Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Cblb-205ENSMUST00000227756 3378 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 BC055308-201ENSMUST00000193380 2538 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm14802-201ENSMUST00000121944 1885 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm4451-201ENSMUST00000186000 1891 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Mmp19-201ENSMUST00000026411 3402 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 AC135669.2-201ENSMUST00000215636 4958 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Lrrc29-204ENSMUST00000210801 3830 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm19337-201ENSMUST00000218100 1584 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Prkd3-202ENSMUST00000118768 2847 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Cenpq-201ENSMUST00000087114 1942 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Lnpk-202ENSMUST00000102676 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Dixdc1-206ENSMUST00000120622 1379 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 AU021092-201ENSMUST00000050160 1363 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Serpina1c-201ENSMUST00000074051 1361 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Igkv14-130-201ENSMUST00000103307 350 ntAPPRIS ALT2 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Parp11-204ENSMUST00000112195 733 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Zscan30-201ENSMUST00000115829 484 ntTSL 2 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm15159-201ENSMUST00000117062 764 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm12038-201ENSMUST00000117322 207 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm12636-201ENSMUST00000117395 624 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm12385-201ENSMUST00000117439 795 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm7910-201ENSMUST00000117896 835 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm14860-201ENSMUST00000120277 429 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm13459-201ENSMUST00000121558 646 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm14122-201ENSMUST00000122076 973 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Rpl37rt-202ENSMUST00000124641 294 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm14260-201ENSMUST00000125121 260 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 4930401O10Rik-201ENSMUST00000128489 787 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Lypd8-201ENSMUST00000013787 1093 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm16235-201ENSMUST00000146132 342 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 D630023F18Rik-202ENSMUST00000148020 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm16334-201ENSMUST00000159488 694 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm15833-201ENSMUST00000161563 957 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm6650-201ENSMUST00000166710 614 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 1700009J07Rik-201ENSMUST00000178996 912 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm6669-201ENSMUST00000179088 997 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm26738-201ENSMUST00000181312 601 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm6410-201ENSMUST00000181337 1105 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm4651-201ENSMUST00000181738 1283 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm29600-201ENSMUST00000188687 377 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm37771-201ENSMUST00000193121 265 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm42654-201ENSMUST00000200789 494 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Olfr1396-203ENSMUST00000203007 981 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm31532-201ENSMUST00000203555 767 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm44665-201ENSMUST00000205381 251 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm35177-201ENSMUST00000216525 623 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Anapc15-ps-202ENSMUST00000218771 399 ntAPPRIS P5 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 AC157570.2-201ENSMUST00000219091 700 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Ryk-ps1-201ENSMUST00000219713 235 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Zfp389-202ENSMUST00000224437 1234 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 AC163631.1-201ENSMUST00000225041 598 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 CT025603.4-201ENSMUST00000225777 413 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 AC154598.2-201ENSMUST00000227114 604 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Rpl31-201ENSMUST00000086535 1049 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm6304-201ENSMUST00000096579 447 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 L3mbtl3-202ENSMUST00000105519 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm16575-201ENSMUST00000162186 1615 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 AC170188.1-201ENSMUST00000223710 1963 ntBASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Smok3c-202ENSMUST00000178402 1515 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Prpf38a-201ENSMUST00000079213 1516 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Kcnma1-206ENSMUST00000163322 3162 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Phc3-203ENSMUST00000099163 2808 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Ece2-208ENSMUST00000120394 3432 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm31182-201ENSMUST00000219061 2391 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Prps1l1-201ENSMUST00000134550 1676 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Gpr1-201ENSMUST00000050536 1940 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim39Q9ESN2 Dtwd1-202ENSMUST00000170908 1342 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms