Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Stat1-206ENSMUST00000186857 4241 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Muc13-202ENSMUST00000115044 2969 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Gm44835-201ENSMUST00000205544 3181 ntBASIC9.51□□□□□ -0.89
RtcbQ99LF4 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Fto-201ENSMUST00000069718 3564 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Dusp3-201ENSMUST00000003612 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Tex9-201ENSMUST00000085358 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Gm9750-201ENSMUST00000142025 2017 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Gm38380-201ENSMUST00000195718 2248 ntBASIC9.5□□□□□ -0.89
RtcbQ99LF4 Prickle2-203ENSMUST00000113446 7860 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
RtcbQ99LF4 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Adgrg1-202ENSMUST00000179619 3616 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Gm25414-201ENSMUST00000101814 107 ntBASIC9.5□□□□□ -0.89
RtcbQ99LF4 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Gm15933-201ENSMUST00000117215 616 ntBASIC9.5□□□□□ -0.89
RtcbQ99LF4 Gm15578-201ENSMUST00000117320 475 ntBASIC9.5□□□□□ -0.89
RtcbQ99LF4 Gm13130-201ENSMUST00000119195 1166 ntBASIC9.5□□□□□ -0.89
RtcbQ99LF4 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC9.5□□□□□ -0.89
RtcbQ99LF4 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Gm22533-201ENSMUST00000158821 274 ntBASIC9.5□□□□□ -0.89
RtcbQ99LF4 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Gm20452-201ENSMUST00000174686 513 ntBASIC9.5□□□□□ -0.89
RtcbQ99LF4 Gm24157-201ENSMUST00000175265 111 ntBASIC9.5□□□□□ -0.89
RtcbQ99LF4 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Gm18547-201ENSMUST00000192439 811 ntBASIC9.5□□□□□ -0.89
RtcbQ99LF4 Gm3549-201ENSMUST00000203873 794 ntBASIC9.5□□□□□ -0.89
RtcbQ99LF4 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC9.5□□□□□ -0.89
RtcbQ99LF4 Gm6581-201ENSMUST00000214545 260 ntBASIC9.5□□□□□ -0.89
RtcbQ99LF4 AC127224.1-201ENSMUST00000218094 453 ntBASIC9.5□□□□□ -0.89
RtcbQ99LF4 AC167202.1-201ENSMUST00000219027 331 ntBASIC9.5□□□□□ -0.89
RtcbQ99LF4 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
RtcbQ99LF4 AC164629.1-201ENSMUST00000220250 1113 ntBASIC9.5□□□□□ -0.89
RtcbQ99LF4 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC9.5□□□□□ -0.89
RtcbQ99LF4 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC9.5□□□□□ -0.89
RtcbQ99LF4 AC134335.1-201ENSMUST00000227626 329 ntBASIC9.5□□□□□ -0.89
RtcbQ99LF4 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
RtcbQ99LF4 AI182371-206ENSMUST00000226631 1680 ntAPPRIS ALT2 BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Gm26790-201ENSMUST00000181078 2291 ntTSL 5 BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
RtcbQ99LF4 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC9.5□□□□□ -0.89
RtcbQ99LF4 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Steap4-201ENSMUST00000115421 3155 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Rab36-206ENSMUST00000146440 2952 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
RtcbQ99LF4 CT009711.1-201ENSMUST00000223992 3040 ntBASIC9.5□□□□□ -0.89
RtcbQ99LF4 Rlim-202ENSMUST00000121153 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Olfr1532-ps1-203ENSMUST00000215949 2439 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
RtcbQ99LF4 Gm26831-201ENSMUST00000181458 1380 ntBASIC9.5□□□□□ -0.89
RtcbQ99LF4 Vegfd-201ENSMUST00000033751 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
RtcbQ99LF4 Kif14-201ENSMUST00000047817 8770 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
RtcbQ99LF4 Aasdh-201ENSMUST00000069709 3381 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
RtcbQ99LF4 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC9.49□□□□□ -0.89
RtcbQ99LF4 Acsl1-203ENSMUST00000110372 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
RtcbQ99LF4 Sgsh-201ENSMUST00000005173 4357 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
RtcbQ99LF4 Gm45873-201ENSMUST00000211865 1915 ntBASIC9.49□□□□□ -0.89
RtcbQ99LF4 Gbp6-201ENSMUST00000196520 2604 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
RtcbQ99LF4 Tnfsf15-201ENSMUST00000062246 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
RtcbQ99LF4 n-R5s1-201ENSMUST00000101925 119 ntBASIC9.49□□□□□ -0.89
RtcbQ99LF4 Gm22671-201ENSMUST00000104420 134 ntBASIC9.49□□□□□ -0.89
RtcbQ99LF4 Mir466f-3-201ENSMUST00000104788 94 ntBASIC9.49□□□□□ -0.89
RtcbQ99LF4 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
RtcbQ99LF4 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
RtcbQ99LF4 Gm5228-201ENSMUST00000117186 357 ntBASIC9.49□□□□□ -0.89
RtcbQ99LF4 Gm13243-201ENSMUST00000117481 565 ntBASIC9.49□□□□□ -0.89
RtcbQ99LF4 Gm15007-201ENSMUST00000119982 710 ntBASIC9.49□□□□□ -0.89
RtcbQ99LF4 Gm11474-201ENSMUST00000120814 277 ntBASIC9.49□□□□□ -0.89
RtcbQ99LF4 Gm12804-201ENSMUST00000121030 999 ntBASIC9.49□□□□□ -0.89
RtcbQ99LF4 Gm5834-201ENSMUST00000126680 1026 ntBASIC9.49□□□□□ -0.89
RtcbQ99LF4 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC9.49□□□□□ -0.89
RtcbQ99LF4 Gm24680-201ENSMUST00000158759 126 ntBASIC9.49□□□□□ -0.89
RtcbQ99LF4 Gm4540-201ENSMUST00000170669 429 ntBASIC9.49□□□□□ -0.89
RtcbQ99LF4 Gm25640-201ENSMUST00000175378 125 ntBASIC9.49□□□□□ -0.89
RtcbQ99LF4 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
RtcbQ99LF4 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
RtcbQ99LF4 Gm26595-201ENSMUST00000181585 484 ntBASIC9.49□□□□□ -0.89
RtcbQ99LF4 Gm17786-201ENSMUST00000182000 427 ntBASIC9.49□□□□□ -0.89
RtcbQ99LF4 Gm19480-201ENSMUST00000185547 667 ntBASIC9.49□□□□□ -0.89
RtcbQ99LF4 Gm8004-201ENSMUST00000187782 617 ntBASIC9.49□□□□□ -0.89
RtcbQ99LF4 Gm29640-201ENSMUST00000187972 278 ntBASIC9.49□□□□□ -0.89
RtcbQ99LF4 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC9.49□□□□□ -0.89
RtcbQ99LF4 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC9.49□□□□□ -0.89
RtcbQ99LF4 Gm37614-201ENSMUST00000195645 210 ntBASIC9.49□□□□□ -0.89
RtcbQ99LF4 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC9.49□□□□□ -0.89
RtcbQ99LF4 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC9.49□□□□□ -0.89
RtcbQ99LF4 Gm7588-201ENSMUST00000216866 571 ntBASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms