Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm18619-201ENSMUST00000222722 1147 ntBASIC7.2□□□□□ -1.26
Clrn1Q8K445 CT009711.2-202ENSMUST00000224538 973 ntBASIC7.2□□□□□ -1.26
Clrn1Q8K445 AC154649.2-201ENSMUST00000228189 808 ntBASIC7.2□□□□□ -1.26
Clrn1Q8K445 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Clrn1Q8K445 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Clrn1Q8K445 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Clrn1Q8K445 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Clrn1Q8K445 Gm17841-201ENSMUST00000210711 2425 ntBASIC7.2□□□□□ -1.26
Clrn1Q8K445 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC7.2□□□□□ -1.26
Clrn1Q8K445 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Clrn1Q8K445 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC7.2□□□□□ -1.26
Clrn1Q8K445 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
Clrn1Q8K445 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Clrn1Q8K445 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC7.19□□□□□ -1.26
Clrn1Q8K445 Gm43519-201ENSMUST00000197239 1872 ntBASIC7.19□□□□□ -1.26
Clrn1Q8K445 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Clrn1Q8K445 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Dtwd1-201ENSMUST00000110437 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Gm12365-201ENSMUST00000117931 568 ntBASIC7.19□□□□□ -1.26
Clrn1Q8K445 Gm11474-201ENSMUST00000120814 277 ntBASIC7.19□□□□□ -1.26
Clrn1Q8K445 Gm13495-201ENSMUST00000121156 537 ntBASIC7.19□□□□□ -1.26
Clrn1Q8K445 Gm15928-201ENSMUST00000122455 280 ntBASIC7.19□□□□□ -1.26
Clrn1Q8K445 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Clrn1Q8K445 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Gm23117-201ENSMUST00000158482 108 ntBASIC7.19□□□□□ -1.26
Clrn1Q8K445 Gm17097-201ENSMUST00000166414 714 ntBASIC7.19□□□□□ -1.26
Clrn1Q8K445 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Gm25574-201ENSMUST00000175245 249 ntBASIC7.19□□□□□ -1.26
Clrn1Q8K445 Mir6340-201ENSMUST00000183857 119 ntBASIC7.19□□□□□ -1.26
Clrn1Q8K445 Gm18033-201ENSMUST00000186678 550 ntBASIC7.19□□□□□ -1.26
Clrn1Q8K445 Gm5066-201ENSMUST00000188479 822 ntBASIC7.19□□□□□ -1.26
Clrn1Q8K445 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Gm19002-201ENSMUST00000192649 1012 ntBASIC7.19□□□□□ -1.26
Clrn1Q8K445 Gm38078-201ENSMUST00000192771 392 ntBASIC7.19□□□□□ -1.26
Clrn1Q8K445 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC7.19□□□□□ -1.26
Clrn1Q8K445 Gm37724-201ENSMUST00000195240 1221 ntBASIC7.19□□□□□ -1.26
Clrn1Q8K445 Gm43774-201ENSMUST00000196327 878 ntBASIC7.19□□□□□ -1.26
Clrn1Q8K445 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Gm42983-201ENSMUST00000199879 815 ntBASIC7.19□□□□□ -1.26
Clrn1Q8K445 Gm42584-201ENSMUST00000201404 220 ntBASIC7.19□□□□□ -1.26
Clrn1Q8K445 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Clrn1Q8K445 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Olfr209-204ENSMUST00000213779 564 ntTSL 5 BASIC7.19□□□□□ -1.26
Clrn1Q8K445 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Gm18243-201ENSMUST00000220756 887 ntBASIC7.19□□□□□ -1.26
Clrn1Q8K445 AC173345.3-201ENSMUST00000221245 1093 ntBASIC7.19□□□□□ -1.26
Clrn1Q8K445 AC129537.1-202ENSMUST00000226619 430 ntBASIC7.19□□□□□ -1.26
Clrn1Q8K445 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Clrn1Q8K445 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC7.19□□□□□ -1.26
Clrn1Q8K445 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Gm6823-201ENSMUST00000120791 1839 ntBASIC7.19□□□□□ -1.26
Clrn1Q8K445 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Clrn1Q8K445 AC151904.4-201ENSMUST00000219868 1319 ntBASIC7.19□□□□□ -1.26
Clrn1Q8K445 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC7.19□□□□□ -1.26
Clrn1Q8K445 Gm38200-201ENSMUST00000192083 2111 ntBASIC7.19□□□□□ -1.26
Clrn1Q8K445 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
Clrn1Q8K445 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Clrn1Q8K445 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm44117-201ENSMUST00000204442 1758 ntBASIC7.18□□□□□ -1.26
Clrn1Q8K445 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm20775-201ENSMUST00000100115 1851 ntBASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm13828-201ENSMUST00000122278 363 ntBASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Mir1962-201ENSMUST00000157516 121 ntBASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm26407-201ENSMUST00000158504 307 ntBASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm25971-201ENSMUST00000158953 286 ntBASIC7.18□□□□□ -1.26
Clrn1Q8K445 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm16112-201ENSMUST00000159075 382 ntBASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms