Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 AC107453.1-201ENSMUST00000227490 3268 ntBASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Gm38244-201ENSMUST00000191737 2586 ntBASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Nup88Q8CEC0 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Gm7842-201ENSMUST00000217691 1379 ntBASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Gm37745-201ENSMUST00000193304 8163 ntBASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Gm11855-201ENSMUST00000121562 1869 ntBASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Nup88Q8CEC0 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Gm11434-201ENSMUST00000122379 629 ntBASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Gm22035-201ENSMUST00000157284 228 ntBASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Mir6340-201ENSMUST00000183857 119 ntBASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC8.75□□□□□ -1.01
Nup88Q8CEC0 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Gm29355-201ENSMUST00000188178 697 ntBASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Gm28953-201ENSMUST00000188336 697 ntBASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Gm20788-201ENSMUST00000190538 697 ntBASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Gm37395-201ENSMUST00000194721 697 ntBASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Gm27680-202ENSMUST00000199221 807 ntBASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Gm18559-201ENSMUST00000208249 604 ntBASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC8.75□□□□□ -1.01
Nup88Q8CEC0 AC164294.1-201ENSMUST00000224682 688 ntBASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Nup88Q8CEC0 St7-206ENSMUST00000115417 2168 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Nup88Q8CEC0 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 AC154482.1-201ENSMUST00000223248 2483 ntBASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Gm43623-201ENSMUST00000199289 2663 ntBASIC8.74□□□□□ -1.01
Nup88Q8CEC0 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Mir503-201ENSMUST00000102168 71 ntBASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Gm25546-201ENSMUST00000103977 132 ntBASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Gm6491-201ENSMUST00000118273 990 ntBASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Gm13828-201ENSMUST00000122278 363 ntBASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Gm21430-201ENSMUST00000182998 998 ntBASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Gm27458-201ENSMUST00000185108 121 ntBASIC8.74□□□□□ -1.01
Nup88Q8CEC0 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Gm29435-201ENSMUST00000191310 689 ntBASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Gm7512-201ENSMUST00000195217 1170 ntBASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Gm6166-201ENSMUST00000098689 409 ntBASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Gm28583-201ENSMUST00000188903 2141 ntBASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Nup88Q8CEC0 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Gm37321-201ENSMUST00000195742 1872 ntBASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Nup88Q8CEC0 AC154270.2-201ENSMUST00000226755 2306 ntBASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Gm11474-201ENSMUST00000120814 277 ntBASIC8.73□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms