Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smarcc1P97496 Satb1-213ENSMUST00000169480 6194 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.89
Smarcc1P97496 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smarcc1P97496 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Smarcc1P97496 Gm15484-201ENSMUST00000118871 828 ntBASIC9.46□□□□□ -0.9
Smarcc1P97496 Gm13900-201ENSMUST00000119402 498 ntBASIC9.46□□□□□ -0.9
Smarcc1P97496 Gm4773-201ENSMUST00000120392 702 ntBASIC9.46□□□□□ -0.9
Smarcc1P97496 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC9.46□□□□□ -0.9
Smarcc1P97496 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC9.46□□□□□ -0.9
Smarcc1P97496 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC9.46□□□□□ -0.9
Smarcc1P97496 Trbv27-201ENSMUST00000193711 277 ntBASIC9.46□□□□□ -0.9
Smarcc1P97496 Gm42734-201ENSMUST00000201656 878 ntBASIC9.46□□□□□ -0.9
Smarcc1P97496 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Smarcc1P97496 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Smarcc1P97496 AC108947.1-201ENSMUST00000224274 1000 ntBASIC9.46□□□□□ -0.9
Smarcc1P97496 AC116596.2-203ENSMUST00000227345 731 ntBASIC9.46□□□□□ -0.9
Smarcc1P97496 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Smarcc1P97496 Kcnma1-224ENSMUST00000224077 3537 ntAPPRIS ALT2 BASIC9.46□□□□□ -0.9
Smarcc1P97496 Gm37410-201ENSMUST00000193623 3039 ntBASIC9.46□□□□□ -0.9
Smarcc1P97496 Gsdmc3-201ENSMUST00000089894 1443 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Smarcc1P97496 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smarcc1P97496 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smarcc1P97496 Gm43411-201ENSMUST00000196235 1579 ntBASIC9.46□□□□□ -0.9
Smarcc1P97496 Tpd52l2-204ENSMUST00000108800 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smarcc1P97496 Umps-201ENSMUST00000023510 3484 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smarcc1P97496 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smarcc1P97496 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smarcc1P97496 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Smarcc1P97496 Lrrc29-204ENSMUST00000210801 3830 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smarcc1P97496 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smarcc1P97496 Kcnma1-206ENSMUST00000163322 3162 ntTSL 5 BASIC9.45□□□□□ -0.9
Smarcc1P97496 Kcnma1-210ENSMUST00000179836 3177 ntTSL 5 BASIC9.45□□□□□ -0.9
Smarcc1P97496 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smarcc1P97496 Napg-201ENSMUST00000025474 3562 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smarcc1P97496 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC9.45□□□□□ -0.9
Smarcc1P97496 Gm11412-201ENSMUST00000144875 2800 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smarcc1P97496 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smarcc1P97496 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smarcc1P97496 Gm12955-201ENSMUST00000119689 957 ntBASIC9.45□□□□□ -0.9
Smarcc1P97496 Gm14503-201ENSMUST00000130337 1164 ntBASIC9.45□□□□□ -0.9
Smarcc1P97496 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smarcc1P97496 Gm25690-201ENSMUST00000175439 77 ntBASIC9.45□□□□□ -0.9
Smarcc1P97496 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC9.45□□□□□ -0.9
Smarcc1P97496 Gm29464-201ENSMUST00000187692 513 ntBASIC9.45□□□□□ -0.9
Smarcc1P97496 Gm36928-201ENSMUST00000192466 694 ntBASIC9.45□□□□□ -0.9
Smarcc1P97496 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC9.45□□□□□ -0.9
Smarcc1P97496 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC9.45□□□□□ -0.9
Smarcc1P97496 Gm37325-201ENSMUST00000194971 694 ntBASIC9.45□□□□□ -0.9
Smarcc1P97496 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC9.45□□□□□ -0.9
Smarcc1P97496 Gm4972-201ENSMUST00000211108 1254 ntBASIC9.45□□□□□ -0.9
Smarcc1P97496 AC069561.1-201ENSMUST00000213750 424 ntBASIC9.45□□□□□ -0.9
Smarcc1P97496 AC151971.2-201ENSMUST00000217540 909 ntBASIC9.45□□□□□ -0.9
Smarcc1P97496 AC133948.2-201ENSMUST00000217850 378 ntBASIC9.45□□□□□ -0.9
Smarcc1P97496 Gm17611-202ENSMUST00000220613 814 ntBASIC9.45□□□□□ -0.9
Smarcc1P97496 Gm18955-201ENSMUST00000223173 649 ntBASIC9.45□□□□□ -0.9
Smarcc1P97496 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC9.45□□□□□ -0.9
Smarcc1P97496 CT030238.3-201ENSMUST00000227352 875 ntBASIC9.45□□□□□ -0.9
Smarcc1P97496 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Smarcc1P97496 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Smarcc1P97496 n-R5s60-201ENSMUST00000083299 119 ntBASIC9.45□□□□□ -0.9
Smarcc1P97496 Gm5446-201ENSMUST00000091762 784 ntBASIC9.45□□□□□ -0.9
Smarcc1P97496 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Smarcc1P97496 Gm37891-201ENSMUST00000195585 1326 ntBASIC9.45□□□□□ -0.9
Smarcc1P97496 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smarcc1P97496 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Smarcc1P97496 B230364G03Rik-201ENSMUST00000181479 1374 ntTSL 2 BASIC9.45□□□□□ -0.9
Smarcc1P97496 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smarcc1P97496 Gm44289-201ENSMUST00000204144 1390 ntBASIC9.45□□□□□ -0.9
Smarcc1P97496 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC9.45□□□□□ -0.9
Smarcc1P97496 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smarcc1P97496 Gm17076-201ENSMUST00000165185 1401 ntBASIC9.45□□□□□ -0.9
Smarcc1P97496 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smarcc1P97496 Gm9256-201ENSMUST00000198106 1420 ntBASIC9.45□□□□□ -0.9
Smarcc1P97496 Gm44441-201ENSMUST00000203642 2475 ntBASIC9.45□□□□□ -0.9
Smarcc1P97496 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Smarcc1P97496 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smarcc1P97496 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smarcc1P97496 Hrh2-201ENSMUST00000038101 2789 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smarcc1P97496 Zfp207-208ENSMUST00000188489 2898 ntAPPRIS ALT1 TSL 2 BASIC9.45□□□□□ -0.9
Smarcc1P97496 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smarcc1P97496 Ccnyl1-201ENSMUST00000094898 2923 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Smarcc1P97496 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smarcc1P97496 Atxn7l1-213ENSMUST00000154742 3548 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smarcc1P97496 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smarcc1P97496 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC9.44□□□□□ -0.9
Smarcc1P97496 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC9.44□□□□□ -0.9
Smarcc1P97496 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC9.44□□□□□ -0.9
Smarcc1P97496 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC9.44□□□□□ -0.9
Smarcc1P97496 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC9.44□□□□□ -0.9
Smarcc1P97496 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC9.44□□□□□ -0.9
Smarcc1P97496 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smarcc1P97496 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC9.44□□□□□ -0.9
Smarcc1P97496 Pla2g4d-201ENSMUST00000094665 3688 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smarcc1P97496 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smarcc1P97496 Gm13081-201ENSMUST00000121527 5599 ntBASIC9.44□□□□□ -0.9
Smarcc1P97496 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Smarcc1P97496 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smarcc1P97496 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
Smarcc1P97496 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC9.44□□□□□ -0.9
Smarcc1P97496 Zfp68-202ENSMUST00000085852 3318 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms