Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm43872-201ENSMUST00000203218 2213 ntBASIC9.94□□□□□ -0.82
Nkx2-3P97334 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Nkx2-3P97334 Arsg-203ENSMUST00000106697 3232 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Nkx2-3P97334 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-3P97334 Cfap65-201ENSMUST00000094844 5727 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-3P97334 Gm12258-201ENSMUST00000093768 2524 ntBASIC9.93□□□□□ -0.82
Nkx2-3P97334 Tgs1-201ENSMUST00000052712 4327 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-3P97334 6330549D23Rik-203ENSMUST00000160818 3228 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-3P97334 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-3P97334 AC164297.4-201ENSMUST00000224225 1307 ntBASIC9.93□□□□□ -0.82
Nkx2-3P97334 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-3P97334 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-3P97334 Serpina3h-202ENSMUST00000116393 1226 ntBASIC9.93□□□□□ -0.82
Nkx2-3P97334 Gm13768-201ENSMUST00000116469 929 ntBASIC9.93□□□□□ -0.82
Nkx2-3P97334 Gm14356-201ENSMUST00000118322 869 ntBASIC9.93□□□□□ -0.82
Nkx2-3P97334 Gm15040-201ENSMUST00000118561 1241 ntBASIC9.93□□□□□ -0.82
Nkx2-3P97334 Gm14906-201ENSMUST00000119265 390 ntBASIC9.93□□□□□ -0.82
Nkx2-3P97334 Gm11945-201ENSMUST00000120551 476 ntBASIC9.93□□□□□ -0.82
Nkx2-3P97334 Gm15362-201ENSMUST00000121459 388 ntBASIC9.93□□□□□ -0.82
Nkx2-3P97334 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-3P97334 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-3P97334 Gm24854-201ENSMUST00000158025 98 ntBASIC9.93□□□□□ -0.82
Nkx2-3P97334 Gm27034-201ENSMUST00000182552 940 ntBASIC9.93□□□□□ -0.82
Nkx2-3P97334 Gm27864-201ENSMUST00000183704 190 ntBASIC9.93□□□□□ -0.82
Nkx2-3P97334 Gm37989-201ENSMUST00000195202 803 ntBASIC9.93□□□□□ -0.82
Nkx2-3P97334 Gm42824-201ENSMUST00000199361 247 ntBASIC9.93□□□□□ -0.82
Nkx2-3P97334 Gm44181-201ENSMUST00000203106 483 ntBASIC9.93□□□□□ -0.82
Nkx2-3P97334 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Nkx2-3P97334 Gm5176-201ENSMUST00000218244 1227 ntBASIC9.93□□□□□ -0.82
Nkx2-3P97334 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC9.93□□□□□ -0.82
Nkx2-3P97334 Gm46317-201ENSMUST00000221103 393 ntBASIC9.93□□□□□ -0.82
Nkx2-3P97334 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-3P97334 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-3P97334 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Nkx2-3P97334 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-3P97334 Adcy9-202ENSMUST00000117801 4507 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-3P97334 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC9.93□□□□□ -0.82
Nkx2-3P97334 AC126251.1-201ENSMUST00000228170 2707 ntBASIC9.93□□□□□ -0.82
Nkx2-3P97334 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-3P97334 Rnf19a-203ENSMUST00000228358 3452 ntBASIC9.93□□□□□ -0.82
Nkx2-3P97334 Paics-202ENSMUST00000117536 1862 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Nkx2-3P97334 Clasp2-202ENSMUST00000163895 4112 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Nkx2-3P97334 Gm28112-201ENSMUST00000190898 1875 ntBASIC9.93□□□□□ -0.82
Nkx2-3P97334 Mon2-203ENSMUST00000170935 5302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-3P97334 Nup214-201ENSMUST00000065398 6605 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-3P97334 AC123842.1-201ENSMUST00000217622 3118 ntTSL 5 BASIC9.93□□□□□ -0.82
Nkx2-3P97334 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-3P97334 Slco2b1-203ENSMUST00000107088 4369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-3P97334 Sec16b-203ENSMUST00000111700 4369 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-3P97334 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-3P97334 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC9.93□□□□□ -0.82
Nkx2-3P97334 AC091783.1-201ENSMUST00000223614 1613 ntBASIC9.93□□□□□ -0.82
Nkx2-3P97334 Kcnma1-224ENSMUST00000224077 3537 ntAPPRIS ALT2 BASIC9.93□□□□□ -0.82
Nkx2-3P97334 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Nkx2-3P97334 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Phc2-203ENSMUST00000106080 3885 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Rin3-204ENSMUST00000133820 3755 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Gm17575-201ENSMUST00000180437 1991 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Celf2-221ENSMUST00000182706 2525 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Sgk2-202ENSMUST00000117123 3034 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Hmgcs1-202ENSMUST00000224188 3464 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Stambp-201ENSMUST00000068054 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Oacyl-201ENSMUST00000115097 3431 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Cacna1c-213ENSMUST00000188078 6519 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Cacna1c-217ENSMUST00000188865 6519 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Gm11810-201ENSMUST00000118311 333 ntBASIC9.92□□□□□ -0.82
Nkx2-3P97334 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Gm26355-201ENSMUST00000158220 105 ntBASIC9.92□□□□□ -0.82
Nkx2-3P97334 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC9.92□□□□□ -0.82
Nkx2-3P97334 Gm20690-201ENSMUST00000177341 315 ntBASIC9.92□□□□□ -0.82
Nkx2-3P97334 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-3P97334 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Gm7763-201ENSMUST00000182220 1006 ntBASIC9.92□□□□□ -0.82
Nkx2-3P97334 Gm37328-201ENSMUST00000193191 640 ntBASIC9.92□□□□□ -0.82
Nkx2-3P97334 Gm19066-201ENSMUST00000193232 1078 ntBASIC9.92□□□□□ -0.82
Nkx2-3P97334 Gm43812-202ENSMUST00000202701 581 ntBASIC9.92□□□□□ -0.82
Nkx2-3P97334 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-3P97334 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC9.92□□□□□ -0.82
Nkx2-3P97334 Gm5305-201ENSMUST00000204010 746 ntBASIC9.92□□□□□ -0.82
Nkx2-3P97334 Gm44112-201ENSMUST00000204787 372 ntBASIC9.92□□□□□ -0.82
Nkx2-3P97334 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC9.92□□□□□ -0.82
Nkx2-3P97334 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC9.92□□□□□ -0.82
Nkx2-3P97334 AC132384.13-201ENSMUST00000219556 1159 ntBASIC9.92□□□□□ -0.82
Nkx2-3P97334 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Emc1-202ENSMUST00000082262 6226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Hnf4g-201ENSMUST00000108393 2224 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-3P97334 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Gm36120-201ENSMUST00000214393 1734 ntTSL 5 BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Itgam-203ENSMUST00000106242 4649 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Nkx2-3P97334 Gm13415-201ENSMUST00000131886 3089 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms