Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CiitaP79621 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CiitaP79621 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CiitaP79621 Gm38300-201ENSMUST00000194245 1870 ntBASIC8.09□□□□□ -1.11
CiitaP79621 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CiitaP79621 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CiitaP79621 Gm26945-201ENSMUST00000183191 2011 ntBASIC8.09□□□□□ -1.11
CiitaP79621 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CiitaP79621 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC8.09□□□□□ -1.11
CiitaP79621 Lockd-201ENSMUST00000183867 5662 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CiitaP79621 Gm25757-201ENSMUST00000103986 123 ntBASIC8.09□□□□□ -1.11
CiitaP79621 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC8.09□□□□□ -1.11
CiitaP79621 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CiitaP79621 Gm11850-201ENSMUST00000119679 479 ntBASIC8.09□□□□□ -1.11
CiitaP79621 Gm14716-201ENSMUST00000120138 718 ntBASIC8.09□□□□□ -1.11
CiitaP79621 Gm11945-201ENSMUST00000120551 476 ntBASIC8.09□□□□□ -1.11
CiitaP79621 Gm11263-201ENSMUST00000121853 749 ntBASIC8.09□□□□□ -1.11
CiitaP79621 Gm22025-201ENSMUST00000122734 302 ntBASIC8.09□□□□□ -1.11
CiitaP79621 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CiitaP79621 Gm2735-201ENSMUST00000136133 277 ntBASIC8.09□□□□□ -1.11
CiitaP79621 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC8.09□□□□□ -1.11
CiitaP79621 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CiitaP79621 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC8.09□□□□□ -1.11
CiitaP79621 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CiitaP79621 Gm7891-201ENSMUST00000190284 843 ntBASIC8.09□□□□□ -1.11
CiitaP79621 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CiitaP79621 Prkar2a-206ENSMUST00000195405 1143 ntTSL 5 BASIC8.09□□□□□ -1.11
CiitaP79621 Gm42464-202ENSMUST00000198111 774 ntBASIC8.09□□□□□ -1.11
CiitaP79621 Gm42734-201ENSMUST00000201656 878 ntBASIC8.09□□□□□ -1.11
CiitaP79621 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CiitaP79621 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC8.09□□□□□ -1.11
CiitaP79621 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CiitaP79621 Gm5305-201ENSMUST00000204010 746 ntBASIC8.09□□□□□ -1.11
CiitaP79621 Gm7943-201ENSMUST00000212078 1034 ntBASIC8.09□□□□□ -1.11
CiitaP79621 AC137950.3-201ENSMUST00000228250 246 ntBASIC8.09□□□□□ -1.11
CiitaP79621 AC154627.1-201ENSMUST00000228799 1286 ntBASIC8.09□□□□□ -1.11
CiitaP79621 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
CiitaP79621 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
CiitaP79621 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC8.09□□□□□ -1.11
CiitaP79621 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CiitaP79621 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC8.09□□□□□ -1.11
CiitaP79621 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CiitaP79621 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
CiitaP79621 AC125409.2-201ENSMUST00000221888 2158 ntBASIC8.09□□□□□ -1.11
CiitaP79621 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CiitaP79621 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
CiitaP79621 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
CiitaP79621 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
CiitaP79621 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CiitaP79621 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
CiitaP79621 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CiitaP79621 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
CiitaP79621 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC8.09□□□□□ -1.12
CiitaP79621 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
CiitaP79621 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.12
CiitaP79621 AC154806.2-201ENSMUST00000227212 2385 ntBASIC8.08□□□□□ -1.12
CiitaP79621 Gm37410-201ENSMUST00000193623 3039 ntBASIC8.08□□□□□ -1.12
CiitaP79621 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
CiitaP79621 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC8.08□□□□□ -1.12
CiitaP79621 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
CiitaP79621 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC8.08□□□□□ -1.12
CiitaP79621 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
CiitaP79621 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC8.08□□□□□ -1.12
CiitaP79621 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CiitaP79621 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CiitaP79621 Gm37109-201ENSMUST00000195475 2254 ntBASIC8.08□□□□□ -1.12
CiitaP79621 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CiitaP79621 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
CiitaP79621 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
CiitaP79621 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CiitaP79621 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CiitaP79621 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
CiitaP79621 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
CiitaP79621 Gm14279-201ENSMUST00000117142 332 ntBASIC8.08□□□□□ -1.12
CiitaP79621 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC8.08□□□□□ -1.12
CiitaP79621 Gm10243-201ENSMUST00000117571 333 ntBASIC8.08□□□□□ -1.12
CiitaP79621 Gm7910-201ENSMUST00000117896 835 ntBASIC8.08□□□□□ -1.12
CiitaP79621 Gm11320-201ENSMUST00000119434 463 ntBASIC8.08□□□□□ -1.12
CiitaP79621 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC8.08□□□□□ -1.12
CiitaP79621 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC8.08□□□□□ -1.12
CiitaP79621 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC8.08□□□□□ -1.12
CiitaP79621 Gm22795-201ENSMUST00000157233 118 ntBASIC8.08□□□□□ -1.12
CiitaP79621 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC8.08□□□□□ -1.12
CiitaP79621 Gm8305-201ENSMUST00000180022 1195 ntBASIC8.08□□□□□ -1.12
CiitaP79621 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC8.08□□□□□ -1.12
CiitaP79621 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC8.08□□□□□ -1.12
CiitaP79621 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC8.08□□□□□ -1.12
CiitaP79621 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC8.08□□□□□ -1.12
CiitaP79621 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CiitaP79621 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC8.08□□□□□ -1.12
CiitaP79621 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC8.08□□□□□ -1.12
CiitaP79621 Gm44590-201ENSMUST00000206161 391 ntBASIC8.08□□□□□ -1.12
CiitaP79621 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CiitaP79621 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC8.08□□□□□ -1.12
CiitaP79621 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CiitaP79621 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC8.08□□□□□ -1.12
CiitaP79621 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC8.08□□□□□ -1.12
CiitaP79621 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC8.08□□□□□ -1.12
CiitaP79621 AC133598.2-201ENSMUST00000224302 624 ntBASIC8.08□□□□□ -1.12
CiitaP79621 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms