Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm37161-201ENSMUST00000191994 2697 ntBASIC9.96□□□□□ -0.82
Nphp4P59240 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Nphp4P59240 Wdfy3-207ENSMUST00000212024 10539 ntTSL 5 BASIC9.96□□□□□ -0.82
Nphp4P59240 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nphp4P59240 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nphp4P59240 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nphp4P59240 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nphp4P59240 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
Nphp4P59240 Gm45807-201ENSMUST00000209142 2874 ntBASIC9.96□□□□□ -0.82
Nphp4P59240 Prpf8-202ENSMUST00000102510 7249 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Nphp4P59240 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nphp4P59240 Tas1r3-201ENSMUST00000030949 3523 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nphp4P59240 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nphp4P59240 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nphp4P59240 Gm6327-201ENSMUST00000171185 1335 ntBASIC9.95□□□□□ -0.82
Nphp4P59240 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC9.95□□□□□ -0.82
Nphp4P59240 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC9.95□□□□□ -0.82
Nphp4P59240 Ep400-203ENSMUST00000112435 10420 ntTSL 5 BASIC9.95□□□□□ -0.82
Nphp4P59240 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Nphp4P59240 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nphp4P59240 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nphp4P59240 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nphp4P59240 AC156025.3-201ENSMUST00000225919 3095 ntBASIC9.95□□□□□ -0.82
Nphp4P59240 Gm25311-201ENSMUST00000104136 132 ntBASIC9.95□□□□□ -0.82
Nphp4P59240 Gm26416-201ENSMUST00000104280 134 ntBASIC9.95□□□□□ -0.82
Nphp4P59240 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC9.95□□□□□ -0.82
Nphp4P59240 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC9.95□□□□□ -0.82
Nphp4P59240 Gm13776-201ENSMUST00000122236 1261 ntBASIC9.95□□□□□ -0.82
Nphp4P59240 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC9.95□□□□□ -0.82
Nphp4P59240 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC9.95□□□□□ -0.82
Nphp4P59240 Gm17212-201ENSMUST00000166666 259 ntBASIC9.95□□□□□ -0.82
Nphp4P59240 Gm2619-202ENSMUST00000166777 651 ntBASIC9.95□□□□□ -0.82
Nphp4P59240 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC9.95□□□□□ -0.82
Nphp4P59240 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Nphp4P59240 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC9.95□□□□□ -0.82
Nphp4P59240 Gm8058-201ENSMUST00000217247 587 ntBASIC9.95□□□□□ -0.82
Nphp4P59240 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC9.95□□□□□ -0.82
Nphp4P59240 AC164294.1-201ENSMUST00000224682 688 ntBASIC9.95□□□□□ -0.82
Nphp4P59240 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC9.95□□□□□ -0.82
Nphp4P59240 Gm24036-201ENSMUST00000082868 156 ntBASIC9.95□□□□□ -0.82
Nphp4P59240 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Nphp4P59240 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nphp4P59240 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nphp4P59240 Elmo2-205ENSMUST00000103091 4695 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nphp4P59240 C87436-203ENSMUST00000113700 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nphp4P59240 Gm2065-201ENSMUST00000194697 2757 ntBASIC9.95□□□□□ -0.82
Nphp4P59240 Ebpl-201ENSMUST00000022494 10092 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nphp4P59240 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nphp4P59240 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nphp4P59240 Gm45737-201ENSMUST00000208344 1612 ntBASIC9.95□□□□□ -0.82
Nphp4P59240 4930551I15Rik-201ENSMUST00000219700 2143 ntTSL 5 BASIC9.95□□□□□ -0.82
Nphp4P59240 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nphp4P59240 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nphp4P59240 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC9.94□□□□□ -0.82
Nphp4P59240 Plekha2-201ENSMUST00000064883 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nphp4P59240 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nphp4P59240 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Nphp4P59240 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nphp4P59240 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nphp4P59240 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nphp4P59240 Eif2ak4-206ENSMUST00000110874 5298 ntTSL 5 BASIC9.94□□□□□ -0.82
Nphp4P59240 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Nphp4P59240 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nphp4P59240 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC9.94□□□□□ -0.82
Nphp4P59240 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Nphp4P59240 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nphp4P59240 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Nphp4P59240 Med12-202ENSMUST00000087956 6746 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Nphp4P59240 Gm22774-201ENSMUST00000102084 109 ntBASIC9.94□□□□□ -0.82
Nphp4P59240 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Nphp4P59240 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Nphp4P59240 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC9.94□□□□□ -0.82
Nphp4P59240 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Nphp4P59240 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Nphp4P59240 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Nphp4P59240 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Nphp4P59240 Gm24519-201ENSMUST00000104507 132 ntBASIC9.94□□□□□ -0.82
Nphp4P59240 Gm12468-201ENSMUST00000116189 404 ntBASIC9.94□□□□□ -0.82
Nphp4P59240 Gm13313-201ENSMUST00000118938 1084 ntBASIC9.94□□□□□ -0.82
Nphp4P59240 Gm14869-201ENSMUST00000119007 884 ntBASIC9.94□□□□□ -0.82
Nphp4P59240 Gm12920-201ENSMUST00000121818 1186 ntBASIC9.94□□□□□ -0.82
Nphp4P59240 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC9.94□□□□□ -0.82
Nphp4P59240 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nphp4P59240 Gm10913-201ENSMUST00000133732 463 ntBASIC9.94□□□□□ -0.82
Nphp4P59240 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Nphp4P59240 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nphp4P59240 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC9.94□□□□□ -0.82
Nphp4P59240 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Nphp4P59240 Gm27156-201ENSMUST00000184589 754 ntBASIC9.94□□□□□ -0.82
Nphp4P59240 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC9.94□□□□□ -0.82
Nphp4P59240 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC9.94□□□□□ -0.82
Nphp4P59240 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC9.94□□□□□ -0.82
Nphp4P59240 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC9.94□□□□□ -0.82
Nphp4P59240 Ighv1-29-201ENSMUST00000194116 342 ntBASIC9.94□□□□□ -0.82
Nphp4P59240 Gm30517-201ENSMUST00000197350 772 ntBASIC9.94□□□□□ -0.82
Nphp4P59240 AC099934.1-201ENSMUST00000200493 79 ntBASIC9.94□□□□□ -0.82
Nphp4P59240 Gm30646-201ENSMUST00000207662 180 ntBASIC9.94□□□□□ -0.82
Nphp4P59240 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC9.94□□□□□ -0.82
Nphp4P59240 AC154515.3-201ENSMUST00000225081 1159 ntBASIC9.94□□□□□ -0.82
Nphp4P59240 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 259.3 ms