Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 AC161426.1-201ENSMUST00000214137 286 ntBASIC8.19□□□□□ -1.1
Sox1P53783 AC113107.1-201ENSMUST00000218358 396 ntTSL 3 BASIC8.19□□□□□ -1.1
Sox1P53783 Gm6869-201ENSMUST00000220334 734 ntBASIC8.19□□□□□ -1.1
Sox1P53783 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC8.19□□□□□ -1.1
Sox1P53783 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Sox1P53783 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Sox1P53783 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Sox1P53783 CT009728.1-201ENSMUST00000225228 1050 ntBASIC8.19□□□□□ -1.1
Sox1P53783 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Sox1P53783 Gm22971-201ENSMUST00000083305 97 ntBASIC8.19□□□□□ -1.1
Sox1P53783 Plekhh1-204ENSMUST00000219956 5229 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sox1P53783 CT009550.4-202ENSMUST00000227369 3076 ntBASIC8.19□□□□□ -1.1
Sox1P53783 Afap1l2-202ENSMUST00000118800 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sox1P53783 Gucy2d-203ENSMUST00000206435 3634 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Sox1P53783 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC8.19□□□□□ -1.1
Sox1P53783 Drp2-206ENSMUST00000153424 7135 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sox1P53783 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sox1P53783 Gm44436-201ENSMUST00000204200 1494 ntBASIC8.19□□□□□ -1.1
Sox1P53783 Vmn1r26-203ENSMUST00000228070 4419 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Sox1P53783 Slc6a3-201ENSMUST00000022100 3456 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sox1P53783 Gm38024-201ENSMUST00000192338 2532 ntBASIC8.19□□□□□ -1.1
Sox1P53783 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Sox1P53783 Myo6-212ENSMUST00000184480 4139 ntTSL 5 BASIC8.18□□□□□ -1.1
Sox1P53783 Zfp672-203ENSMUST00000065533 2619 ntBASIC8.18□□□□□ -1.1
Sox1P53783 Sltm-201ENSMUST00000049263 3691 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sox1P53783 Gm18697-201ENSMUST00000191179 2126 ntBASIC8.18□□□□□ -1.1
Sox1P53783 Inpp5k-201ENSMUST00000006286 2679 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sox1P53783 Adgrl2-203ENSMUST00000168352 2151 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Sox1P53783 Kpna3-201ENSMUST00000022496 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sox1P53783 Tmem19-209ENSMUST00000219890 2949 ntTSL 5 BASIC8.18□□□□□ -1.1
Sox1P53783 Zfp84-201ENSMUST00000032802 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sox1P53783 Gm7882-201ENSMUST00000177915 1762 ntBASIC8.18□□□□□ -1.1
Sox1P53783 Bgn-201ENSMUST00000033741 2419 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sox1P53783 Gm12002-202ENSMUST00000153794 1803 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Sox1P53783 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Sox1P53783 Gm22671-201ENSMUST00000104420 134 ntBASIC8.18□□□□□ -1.1
Sox1P53783 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Sox1P53783 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sox1P53783 Gm15007-201ENSMUST00000119982 710 ntBASIC8.18□□□□□ -1.1
Sox1P53783 Gm14328-201ENSMUST00000122178 408 ntBASIC8.18□□□□□ -1.1
Sox1P53783 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC8.18□□□□□ -1.1
Sox1P53783 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC8.18□□□□□ -1.1
Sox1P53783 Gm16563-201ENSMUST00000162673 423 ntBASIC8.18□□□□□ -1.1
Sox1P53783 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Sox1P53783 Sdhd-201ENSMUST00000000175 1231 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sox1P53783 Gm25617-201ENSMUST00000179548 133 ntBASIC8.18□□□□□ -1.1
Sox1P53783 Gm18501-201ENSMUST00000185363 664 ntBASIC8.18□□□□□ -1.1
Sox1P53783 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Sox1P53783 Gm37632-201ENSMUST00000191811 1142 ntBASIC8.18□□□□□ -1.1
Sox1P53783 Gm37189-201ENSMUST00000192131 298 ntBASIC8.18□□□□□ -1.1
Sox1P53783 Gm37543-201ENSMUST00000192443 1031 ntBASIC8.18□□□□□ -1.1
Sox1P53783 Gm25617-202ENSMUST00000198387 132 ntBASIC8.18□□□□□ -1.1
Sox1P53783 Gm42429-201ENSMUST00000198579 558 ntBASIC8.18□□□□□ -1.1
Sox1P53783 Trav12-4-201ENSMUST00000200663 271 ntBASIC8.18□□□□□ -1.1
Sox1P53783 Gm44053-201ENSMUST00000203364 929 ntBASIC8.18□□□□□ -1.1
Sox1P53783 Gm43967-201ENSMUST00000203787 301 ntBASIC8.18□□□□□ -1.1
Sox1P53783 Gm7587-201ENSMUST00000207618 1021 ntBASIC8.18□□□□□ -1.1
Sox1P53783 AC104906.1-201ENSMUST00000218122 913 ntBASIC8.18□□□□□ -1.1
Sox1P53783 AC192334.3-201ENSMUST00000221828 569 ntTSL 5 BASIC8.18□□□□□ -1.1
Sox1P53783 Gm18960-201ENSMUST00000222962 713 ntBASIC8.18□□□□□ -1.1
Sox1P53783 AC156559.2-201ENSMUST00000224403 384 ntBASIC8.18□□□□□ -1.1
Sox1P53783 AC161275.1-201ENSMUST00000224668 208 ntBASIC8.18□□□□□ -1.1
Sox1P53783 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sox1P53783 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Sox1P53783 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sox1P53783 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sox1P53783 Npy2r-203ENSMUST00000182181 1331 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Sox1P53783 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sox1P53783 Mark3-206ENSMUST00000221459 2807 ntAPPRIS ALT1 TSL 5 BASIC8.18□□□□□ -1.1
Sox1P53783 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sox1P53783 Gm28229-201ENSMUST00000188747 2153 ntBASIC8.18□□□□□ -1.1
Sox1P53783 Iqcg-202ENSMUST00000115100 2916 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sox1P53783 Gm26785-201ENSMUST00000181775 2914 ntTSL 3 BASIC8.18□□□□□ -1.1
Sox1P53783 Zfp507-201ENSMUST00000061586 6693 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sox1P53783 Gm5583-201ENSMUST00000174328 1519 ntBASIC8.18□□□□□ -1.1
Sox1P53783 Dlg2-202ENSMUST00000098308 2329 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Sox1P53783 Nrip1-202ENSMUST00000121927 7868 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sox1P53783 Pde8b-210ENSMUST00000162412 4035 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Sox1P53783 Grip1-215ENSMUST00000148954 3293 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Sox1P53783 Lyrm1-205ENSMUST00000207270 5845 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sox1P53783 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC8.18□□□□□ -1.1
Sox1P53783 Gm7562-201ENSMUST00000210502 2537 ntBASIC8.18□□□□□ -1.1
Sox1P53783 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Sox1P53783 AC154368.2-201ENSMUST00000222334 1724 ntBASIC8.17□□□□□ -1.1
Sox1P53783 Arap1-203ENSMUST00000098243 3693 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Sox1P53783 Cd300a-201ENSMUST00000045151 4633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Sox1P53783 Syt17-201ENSMUST00000081574 2764 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Sox1P53783 Ift122-202ENSMUST00000112923 3765 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Sox1P53783 Cpsf6-208ENSMUST00000177145 3819 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Sox1P53783 Rnasel-201ENSMUST00000086209 2938 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Sox1P53783 Clasp1-220ENSMUST00000191445 4914 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Sox1P53783 Clasp2-202ENSMUST00000163895 4112 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Sox1P53783 Atf7-203ENSMUST00000169033 2165 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Sox1P53783 Tmem63c-202ENSMUST00000131878 3311 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Sox1P53783 Gm37873-201ENSMUST00000194571 2280 ntBASIC8.17□□□□□ -1.1
Sox1P53783 Fam228a-204ENSMUST00000222363 2284 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Sox1P53783 Sema5a-201ENSMUST00000067458 10809 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Sox1P53783 Fam198a-201ENSMUST00000043011 3623 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Sox1P53783 AC124572.1-201ENSMUST00000218155 2406 ntBASIC8.17□□□□□ -1.1
Sox1P53783 Gm24048-201ENSMUST00000102411 106 ntBASIC8.17□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms