Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC7.07□□□□□ -1.28
Tnfsf4P43488 Gm1947-201ENSMUST00000122451 910 ntBASIC7.07□□□□□ -1.28
Tnfsf4P43488 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Gm25692-201ENSMUST00000175444 125 ntBASIC7.07□□□□□ -1.28
Tnfsf4P43488 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Gm9149-201ENSMUST00000182724 1007 ntBASIC7.07□□□□□ -1.28
Tnfsf4P43488 Gm27542-201ENSMUST00000184184 256 ntBASIC7.07□□□□□ -1.28
Tnfsf4P43488 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Gm37295-201ENSMUST00000192186 109 ntBASIC7.07□□□□□ -1.28
Tnfsf4P43488 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC7.07□□□□□ -1.28
Tnfsf4P43488 Gm18207-201ENSMUST00000205486 526 ntBASIC7.07□□□□□ -1.28
Tnfsf4P43488 Gm18192-201ENSMUST00000210174 941 ntBASIC7.07□□□□□ -1.28
Tnfsf4P43488 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Gm32688-201ENSMUST00000213849 585 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Gm18378-201ENSMUST00000216245 628 ntBASIC7.07□□□□□ -1.28
Tnfsf4P43488 BC042761-201ENSMUST00000218344 938 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Tnfsf4P43488 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Olfr402-201ENSMUST00000073675 1012 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Mir135b-201ENSMUST00000083501 97 ntBASIC7.07□□□□□ -1.28
Tnfsf4P43488 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Gm44130-201ENSMUST00000205157 3004 ntBASIC7.07□□□□□ -1.28
Tnfsf4P43488 Gm30698-201ENSMUST00000214789 3198 ntBASIC7.07□□□□□ -1.28
Tnfsf4P43488 Gm7265-201ENSMUST00000192735 3502 ntBASIC7.07□□□□□ -1.28
Tnfsf4P43488 Gm43728-201ENSMUST00000198817 2622 ntBASIC7.07□□□□□ -1.28
Tnfsf4P43488 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Tnfsf4P43488 AC122356.1-202ENSMUST00000227328 2758 ntBASIC7.07□□□□□ -1.28
Tnfsf4P43488 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Tnfsf4P43488 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Tnfsf4P43488 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Tnfsf4P43488 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Tnfsf4P43488 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Tnfsf4P43488 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Tnfsf4P43488 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Tnfsf4P43488 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Tnfsf4P43488 Olfr702-204ENSMUST00000219803 1646 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Tnfsf4P43488 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Tnfsf4P43488 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Tnfsf4P43488 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC7.06□□□□□ -1.28
Tnfsf4P43488 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Tnfsf4P43488 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Tnfsf4P43488 n-R5s72-201ENSMUST00000104518 119 ntBASIC7.06□□□□□ -1.28
Tnfsf4P43488 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC7.06□□□□□ -1.28
Tnfsf4P43488 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Tnfsf4P43488 Gm12632-201ENSMUST00000121223 495 ntBASIC7.06□□□□□ -1.28
Tnfsf4P43488 Gm13282-201ENSMUST00000121577 545 ntBASIC7.06□□□□□ -1.28
Tnfsf4P43488 Gm12920-201ENSMUST00000121818 1186 ntBASIC7.06□□□□□ -1.28
Tnfsf4P43488 Ighv1-62-2-201ENSMUST00000163467 302 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Tnfsf4P43488 Ighv1-71-201ENSMUST00000166645 302 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Tnfsf4P43488 Gm19840-201ENSMUST00000169624 882 ntBASIC7.06□□□□□ -1.28
Tnfsf4P43488 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC7.06□□□□□ -1.28
Tnfsf4P43488 Gm24307-201ENSMUST00000178512 101 ntBASIC7.06□□□□□ -1.28
Tnfsf4P43488 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC7.06□□□□□ -1.28
Tnfsf4P43488 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Tnfsf4P43488 Cnih4-205ENSMUST00000193907 531 ntTSL 2 BASIC7.06□□□□□ -1.28
Tnfsf4P43488 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC7.06□□□□□ -1.28
Tnfsf4P43488 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC7.06□□□□□ -1.28
Tnfsf4P43488 CT009738.1-201ENSMUST00000219031 809 ntBASIC7.06□□□□□ -1.28
Tnfsf4P43488 AC110176.1-201ENSMUST00000226219 504 ntBASIC7.06□□□□□ -1.28
Tnfsf4P43488 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Tnfsf4P43488 Gm25926-201ENSMUST00000082899 160 ntBASIC7.06□□□□□ -1.28
Tnfsf4P43488 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Tnfsf4P43488 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Tnfsf4P43488 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Tnfsf4P43488 Gm37161-201ENSMUST00000191994 2697 ntBASIC7.06□□□□□ -1.28
Tnfsf4P43488 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Tnfsf4P43488 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Tnfsf4P43488 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Tnfsf4P43488 Gm38262-201ENSMUST00000194760 1382 ntBASIC7.06□□□□□ -1.28
Tnfsf4P43488 Gm37090-201ENSMUST00000195694 4105 ntBASIC7.06□□□□□ -1.28
Tnfsf4P43488 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Tnfsf4P43488 Gm45084-201ENSMUST00000207096 1957 ntBASIC7.06□□□□□ -1.28
Tnfsf4P43488 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Tnfsf4P43488 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Tnfsf4P43488 Gm42630-201ENSMUST00000195908 3448 ntBASIC7.05□□□□□ -1.28
Tnfsf4P43488 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Tnfsf4P43488 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Tnfsf4P43488 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC7.05□□□□□ -1.28
Tnfsf4P43488 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC7.05□□□□□ -1.28
Tnfsf4P43488 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC7.05□□□□□ -1.28
Tnfsf4P43488 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Tnfsf4P43488 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 106.1 ms