Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Emc1-205ENSMUST00000179784 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
HttP42859 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
HttP42859 AC162301.1-201ENSMUST00000228785 1542 ntBASIC7.55□□□□□ -1.2
HttP42859 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
HttP42859 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
HttP42859 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
HttP42859 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HttP42859 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC7.54□□□□□ -1.2
HttP42859 Gm22372-201ENSMUST00000104589 136 ntBASIC7.54□□□□□ -1.2
HttP42859 Gm13890-201ENSMUST00000117578 390 ntBASIC7.54□□□□□ -1.2
HttP42859 Gm12844-201ENSMUST00000119463 582 ntBASIC7.54□□□□□ -1.2
HttP42859 Gm16139-201ENSMUST00000160015 420 ntBASIC7.54□□□□□ -1.2
HttP42859 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC7.54□□□□□ -1.2
HttP42859 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC7.54□□□□□ -1.2
HttP42859 Gm5345-201ENSMUST00000183076 1014 ntBASIC7.54□□□□□ -1.2
HttP42859 Gm37475-201ENSMUST00000193107 1015 ntBASIC7.54□□□□□ -1.2
HttP42859 Gm37463-201ENSMUST00000193819 796 ntBASIC7.54□□□□□ -1.2
HttP42859 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC7.54□□□□□ -1.2
HttP42859 Gm43089-201ENSMUST00000199162 275 ntBASIC7.54□□□□□ -1.2
HttP42859 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC7.54□□□□□ -1.2
HttP42859 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
HttP42859 CT025566.1-202ENSMUST00000224800 2511 ntBASIC7.54□□□□□ -1.2
HttP42859 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
HttP42859 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
HttP42859 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
HttP42859 Copa-206ENSMUST00000135192 4622 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HttP42859 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HttP42859 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
HttP42859 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HttP42859 Tma16-201ENSMUST00000026681 4328 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HttP42859 AC159308.1-201ENSMUST00000216615 1351 ntBASIC7.54□□□□□ -1.2
HttP42859 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HttP42859 Gm15332-201ENSMUST00000118386 357 ntBASIC7.54□□□□□ -1.2
HttP42859 Mup-ps28-201ENSMUST00000120686 289 ntBASIC7.54□□□□□ -1.2
HttP42859 Gm13940-201ENSMUST00000121023 301 ntBASIC7.54□□□□□ -1.2
HttP42859 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HttP42859 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
HttP42859 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HttP42859 CT485612.1-201ENSMUST00000222555 382 ntBASIC7.54□□□□□ -1.2
HttP42859 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HttP42859 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HttP42859 Mbnl3-201ENSMUST00000041495 1803 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HttP42859 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
HttP42859 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
HttP42859 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HttP42859 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
HttP42859 Gsdmc3-201ENSMUST00000089894 1443 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
HttP42859 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HttP42859 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
HttP42859 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HttP42859 Chrna2-201ENSMUST00000022620 3554 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HttP42859 Myadm-204ENSMUST00000203566 4028 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HttP42859 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HttP42859 Gm12661-201ENSMUST00000118780 3335 ntBASIC7.54□□□□□ -1.2
HttP42859 Gm16487-201ENSMUST00000105048 4037 ntBASIC7.54□□□□□ -1.2
HttP42859 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
HttP42859 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC7.54□□□□□ -1.2
HttP42859 Rnu11-201ENSMUST00000104135 134 ntBASIC7.54□□□□□ -1.2
HttP42859 Cga-202ENSMUST00000108130 609 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
HttP42859 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HttP42859 Gm13451-201ENSMUST00000117649 592 ntBASIC7.54□□□□□ -1.2
HttP42859 Gm12630-201ENSMUST00000121575 784 ntBASIC7.54□□□□□ -1.2
HttP42859 Gm22312-201ENSMUST00000158005 130 ntBASIC7.54□□□□□ -1.2
HttP42859 Gm2539-203ENSMUST00000181352 746 ntBASIC7.54□□□□□ -1.2
HttP42859 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HttP42859 Gm19116-201ENSMUST00000218592 642 ntBASIC7.54□□□□□ -1.2
HttP42859 Man2b1-201ENSMUST00000034121 3822 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HttP42859 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
HttP42859 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC7.54□□□□□ -1.2
HttP42859 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HttP42859 Pdpr-201ENSMUST00000039333 4938 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HttP42859 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
HttP42859 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
HttP42859 Gm43800-201ENSMUST00000201868 2731 ntBASIC7.53□□□□□ -1.2
HttP42859 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
HttP42859 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
HttP42859 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
HttP42859 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
HttP42859 Fam168a-205ENSMUST00000207875 4077 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
HttP42859 Sestd1-201ENSMUST00000102659 2720 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
HttP42859 Lmbrd1-206ENSMUST00000191471 4453 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
HttP42859 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
HttP42859 Gm18796-201ENSMUST00000190440 1767 ntBASIC7.53□□□□□ -1.2
HttP42859 Gm25780-201ENSMUST00000122528 253 ntBASIC7.53□□□□□ -1.2
HttP42859 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
HttP42859 n-R5s58-201ENSMUST00000093682 119 ntBASIC7.53□□□□□ -1.2
HttP42859 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC7.53□□□□□ -1.2
HttP42859 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC7.53□□□□□ -1.2
HttP42859 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
HttP42859 Gm9226-201ENSMUST00000188352 3489 ntBASIC7.53□□□□□ -1.2
HttP42859 Gm21152-201ENSMUST00000190271 3483 ntBASIC7.53□□□□□ -1.2
HttP42859 Katnb1-201ENSMUST00000034239 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
HttP42859 2310057M21Rik-201ENSMUST00000059438 6773 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
HttP42859 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
HttP42859 Sgk2-202ENSMUST00000117123 3034 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
HttP42859 Entpd5-205ENSMUST00000120942 4881 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
HttP42859 Gm15502-201ENSMUST00000121449 208 ntBASIC7.53□□□□□ -1.2
HttP42859 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC7.53□□□□□ -1.2
HttP42859 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC7.53□□□□□ -1.2
HttP42859 Gm44561-201ENSMUST00000208869 264 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms