Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm38120-201ENSMUST00000195506 4642 ntBASIC6.96□□□□□ -1.3
Sox6P40645 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Sox6P40645 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Sox6P40645 Gm17083-201ENSMUST00000165849 1366 ntBASIC6.95□□□□□ -1.3
Sox6P40645 Gm4863-201ENSMUST00000196907 1381 ntBASIC6.95□□□□□ -1.3
Sox6P40645 Gm43623-201ENSMUST00000199289 2663 ntBASIC6.95□□□□□ -1.3
Sox6P40645 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.95□□□□□ -1.3
Sox6P40645 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Sox6P40645 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Sox6P40645 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Sox6P40645 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Sox6P40645 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Sox6P40645 Gm43728-201ENSMUST00000198817 2622 ntBASIC6.95□□□□□ -1.3
Sox6P40645 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Sox6P40645 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Sox6P40645 Gm28497-201ENSMUST00000189646 3029 ntBASIC6.95□□□□□ -1.3
Sox6P40645 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Sox6P40645 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Sox6P40645 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Sox6P40645 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC6.95□□□□□ -1.3
Sox6P40645 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC6.95□□□□□ -1.3
Sox6P40645 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC6.95□□□□□ -1.3
Sox6P40645 Gm14645-201ENSMUST00000118597 417 ntBASIC6.95□□□□□ -1.3
Sox6P40645 BC002163-201ENSMUST00000121906 319 ntBASIC6.95□□□□□ -1.3
Sox6P40645 Gm15928-201ENSMUST00000122455 280 ntBASIC6.95□□□□□ -1.3
Sox6P40645 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC6.95□□□□□ -1.3
Sox6P40645 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC6.95□□□□□ -1.3
Sox6P40645 Mir1968-201ENSMUST00000157429 68 ntBASIC6.95□□□□□ -1.3
Sox6P40645 Mir1962-201ENSMUST00000157516 121 ntBASIC6.95□□□□□ -1.3
Sox6P40645 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC6.95□□□□□ -1.3
Sox6P40645 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Sox6P40645 Ankrd55-204ENSMUST00000168684 1005 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Sox6P40645 Gm20452-201ENSMUST00000174686 513 ntBASIC6.95□□□□□ -1.3
Sox6P40645 n-R5s115-201ENSMUST00000179019 119 ntBASIC6.95□□□□□ -1.3
Sox6P40645 Gm26269-201ENSMUST00000180144 126 ntBASIC6.95□□□□□ -1.3
Sox6P40645 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Sox6P40645 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC6.95□□□□□ -1.3
Sox6P40645 Gm5251-201ENSMUST00000188959 472 ntBASIC6.95□□□□□ -1.3
Sox6P40645 Gm28264-201ENSMUST00000190657 398 ntTSL 5 BASIC6.95□□□□□ -1.3
Sox6P40645 Gm18797-201ENSMUST00000190809 1174 ntBASIC6.95□□□□□ -1.3
Sox6P40645 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC6.95□□□□□ -1.3
Sox6P40645 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Sox6P40645 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Sox6P40645 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC6.95□□□□□ -1.3
Sox6P40645 Gm5948-201ENSMUST00000219627 839 ntBASIC6.95□□□□□ -1.3
Sox6P40645 AC102689.1-201ENSMUST00000220511 1090 ntBASIC6.95□□□□□ -1.3
Sox6P40645 Gm18619-201ENSMUST00000222722 1147 ntBASIC6.95□□□□□ -1.3
Sox6P40645 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC6.95□□□□□ -1.3
Sox6P40645 AC099629.1-201ENSMUST00000226778 464 ntBASIC6.95□□□□□ -1.3
Sox6P40645 AC165155.1-201ENSMUST00000228932 445 ntBASIC6.95□□□□□ -1.3
Sox6P40645 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Sox6P40645 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Sox6P40645 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
Sox6P40645 n-R5s193-201ENSMUST00000082864 109 ntBASIC6.95□□□□□ -1.3
Sox6P40645 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
Sox6P40645 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Sox6P40645 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Sox6P40645 Gm37618-201ENSMUST00000192891 3075 ntBASIC6.95□□□□□ -1.3
Sox6P40645 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC6.95□□□□□ -1.3
Sox6P40645 Gm20768-201ENSMUST00000199527 2338 ntBASIC6.95□□□□□ -1.3
Sox6P40645 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC6.95□□□□□ -1.3
Sox6P40645 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Sox6P40645 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Sox6P40645 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC6.94□□□□□ -1.3
Sox6P40645 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox6P40645 Gm45528-201ENSMUST00000209854 3145 ntBASIC6.94□□□□□ -1.3
Sox6P40645 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC6.94□□□□□ -1.3
Sox6P40645 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox6P40645 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox6P40645 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox6P40645 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Sox6P40645 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
Sox6P40645 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox6P40645 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Sox6P40645 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox6P40645 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC6.94□□□□□ -1.3
Sox6P40645 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox6P40645 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC6.94□□□□□ -1.3
Sox6P40645 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC6.94□□□□□ -1.3
Sox6P40645 Crem-218ENSMUST00000139537 807 ntTSL 2 BASIC6.94□□□□□ -1.3
Sox6P40645 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox6P40645 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC6.94□□□□□ -1.3
Sox6P40645 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC6.94□□□□□ -1.3
Sox6P40645 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Sox6P40645 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC6.94□□□□□ -1.3
Sox6P40645 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox6P40645 Gm23011-202ENSMUST00000197855 275 ntBASIC6.94□□□□□ -1.3
Sox6P40645 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC6.94□□□□□ -1.3
Sox6P40645 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC6.94□□□□□ -1.3
Sox6P40645 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC6.94□□□□□ -1.3
Sox6P40645 AC165349.2-201ENSMUST00000219097 426 ntBASIC6.94□□□□□ -1.3
Sox6P40645 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox6P40645 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Sox6P40645 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox6P40645 AC165260.6-202ENSMUST00000224959 1958 ntBASIC6.94□□□□□ -1.3
Sox6P40645 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox6P40645 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox6P40645 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox6P40645 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox6P40645 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms