Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm29291-201ENSMUST00000186055 686 ntTSL 3 BASIC7.98□□□□□ -1.13
Usp4P35123 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
Usp4P35123 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC7.98□□□□□ -1.13
Usp4P35123 Gm26413-202ENSMUST00000198972 127 ntBASIC7.98□□□□□ -1.13
Usp4P35123 Gm42884-201ENSMUST00000200729 422 ntTSL 2 BASIC7.98□□□□□ -1.13
Usp4P35123 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Usp4P35123 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC7.98□□□□□ -1.13
Usp4P35123 Gm44833-201ENSMUST00000208368 331 ntBASIC7.98□□□□□ -1.13
Usp4P35123 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Usp4P35123 AC158239.1-201ENSMUST00000216890 779 ntTSL 5 BASIC7.98□□□□□ -1.13
Usp4P35123 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC7.98□□□□□ -1.13
Usp4P35123 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC7.98□□□□□ -1.13
Usp4P35123 Gm17611-202ENSMUST00000220613 814 ntBASIC7.98□□□□□ -1.13
Usp4P35123 AC159293.2-201ENSMUST00000222289 424 ntBASIC7.98□□□□□ -1.13
Usp4P35123 AC174797.4-201ENSMUST00000225510 347 ntBASIC7.98□□□□□ -1.13
Usp4P35123 AC152394.1-201ENSMUST00000227360 1086 ntBASIC7.98□□□□□ -1.13
Usp4P35123 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Usp4P35123 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Usp4P35123 Olfr139-201ENSMUST00000050678 948 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Usp4P35123 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Usp4P35123 6720489N17Rik-201ENSMUST00000091563 318 ntTSL 5 BASIC7.98□□□□□ -1.13
Usp4P35123 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Usp4P35123 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Usp4P35123 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Usp4P35123 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Usp4P35123 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Usp4P35123 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Usp4P35123 Gm43398-201ENSMUST00000196584 2742 ntBASIC7.98□□□□□ -1.13
Usp4P35123 Gm37902-201ENSMUST00000192839 1683 ntBASIC7.98□□□□□ -1.13
Usp4P35123 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Usp4P35123 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Usp4P35123 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Usp4P35123 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Usp4P35123 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Usp4P35123 Gm44116-201ENSMUST00000204269 1525 ntBASIC7.98□□□□□ -1.13
Usp4P35123 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Usp4P35123 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
Usp4P35123 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Usp4P35123 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Usp4P35123 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp4P35123 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Usp4P35123 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Usp4P35123 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp4P35123 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp4P35123 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp4P35123 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp4P35123 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp4P35123 Gm6493-201ENSMUST00000159889 1786 ntBASIC7.97□□□□□ -1.13
Usp4P35123 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp4P35123 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC7.97□□□□□ -1.13
Usp4P35123 Gm37420-201ENSMUST00000195332 2912 ntBASIC7.97□□□□□ -1.13
Usp4P35123 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp4P35123 Gm37906-201ENSMUST00000192050 3035 ntBASIC7.97□□□□□ -1.13
Usp4P35123 Dtwd1-201ENSMUST00000110437 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp4P35123 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp4P35123 Gm13458-201ENSMUST00000118239 367 ntBASIC7.97□□□□□ -1.13
Usp4P35123 Gm12024-201ENSMUST00000118819 1253 ntBASIC7.97□□□□□ -1.13
Usp4P35123 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC7.97□□□□□ -1.13
Usp4P35123 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC7.97□□□□□ -1.13
Usp4P35123 Gm12001-201ENSMUST00000121727 913 ntBASIC7.97□□□□□ -1.13
Usp4P35123 Gm16554-201ENSMUST00000159471 460 ntTSL 3 BASIC7.97□□□□□ -1.13
Usp4P35123 Gm24824-201ENSMUST00000175097 78 ntBASIC7.97□□□□□ -1.13
Usp4P35123 Gm3002-202ENSMUST00000178256 444 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Usp4P35123 Gm2974-202ENSMUST00000180184 447 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Usp4P35123 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC7.97□□□□□ -1.13
Usp4P35123 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC7.97□□□□□ -1.13
Usp4P35123 Gm29362-201ENSMUST00000187898 133 ntBASIC7.97□□□□□ -1.13
Usp4P35123 Gm29517-201ENSMUST00000190744 351 ntBASIC7.97□□□□□ -1.13
Usp4P35123 Gm38289-201ENSMUST00000194273 597 ntTSL 5 BASIC7.97□□□□□ -1.13
Usp4P35123 Gm43471-201ENSMUST00000197550 467 ntBASIC7.97□□□□□ -1.13
Usp4P35123 Trdv3-201ENSMUST00000198551 309 ntBASIC7.97□□□□□ -1.13
Usp4P35123 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC7.97□□□□□ -1.13
Usp4P35123 Gm30771-201ENSMUST00000205683 737 ntTSL 3 BASIC7.97□□□□□ -1.13
Usp4P35123 Spaca7-203ENSMUST00000210276 715 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Usp4P35123 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC7.97□□□□□ -1.13
Usp4P35123 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp4P35123 Gm46313-201ENSMUST00000220463 547 ntBASIC7.97□□□□□ -1.13
Usp4P35123 AC117797.1-201ENSMUST00000223977 695 ntBASIC7.97□□□□□ -1.13
Usp4P35123 AC118006.2-201ENSMUST00000224167 962 ntBASIC7.97□□□□□ -1.13
Usp4P35123 AC163038.4-201ENSMUST00000224942 474 ntBASIC7.97□□□□□ -1.13
Usp4P35123 CT009515.2-201ENSMUST00000226126 736 ntBASIC7.97□□□□□ -1.13
Usp4P35123 Lyzl1-201ENSMUST00000025076 846 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp4P35123 Prap1-201ENSMUST00000026540 620 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp4P35123 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Usp4P35123 Gm37483-201ENSMUST00000194382 1484 ntBASIC7.97□□□□□ -1.13
Usp4P35123 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Usp4P35123 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC7.97□□□□□ -1.13
Usp4P35123 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Usp4P35123 Gria3-209ENSMUST00000165288 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp4P35123 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Usp4P35123 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC7.97□□□□□ -1.13
Usp4P35123 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp4P35123 Gm43341-201ENSMUST00000200104 1308 ntBASIC7.97□□□□□ -1.13
Usp4P35123 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp4P35123 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC7.97□□□□□ -1.13
Usp4P35123 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Usp4P35123 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC7.97□□□□□ -1.13
Usp4P35123 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp4P35123 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp4P35123 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms